KEGG   PATHWAY: toq00030
Entry
toq00030                    Pathway                                
Name
Pentose phosphate pathway - Tolypothrix sp. PCC 7910
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
toq00030  Pentose phosphate pathway
toq00030

Module
toq_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:toq00030]
toq_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:toq00030]
toq_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:toq00030]
toq_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:toq00030]
Other DBs
GO: 0006098
Organism
Tolypothrix sp. PCC 7910 [GN:toq]
Gene
HCG51_18440  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HCG51_18325  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
HCG51_22575  pgl; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
HCG51_17345  gndA; NADP-dependent phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
HCG51_05425  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
HCG51_32450  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
HCG51_17935  transaldolase [KO:K00616] [EC:2.2.1.2]
HCG51_18330  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
HCG51_29480  transaldolase [KO:K00616] [EC:2.2.1.2]
HCG51_19175  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
HCG51_17950  phosphoketolase family protein [KO:K01621] [EC:4.1.2.9 4.1.2.22]
HCG51_30640  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
HCG51_29520  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
HCG51_26035  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
HCG51_28375  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HCG51_01525  SDR family oxidoreductase [KO:K00034] [EC:1.1.1.47]
HCG51_07075  glucose 1-dehydrogenase [KO:K00034] [EC:1.1.1.47]
HCG51_27030  SDR family oxidoreductase [KO:K00034] [EC:1.1.1.47]
HCG51_01500  SMP-30/gluconolactonase/LRE family protein [KO:K01053] [EC:3.1.1.17]
HCG51_06420  SMP-30/gluconolactonase/LRE family protein [KO:K01053] [EC:3.1.1.17]
HCG51_32705  gluconokinase [KO:K00851] [EC:2.7.1.12]
HCG51_32630  class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
HCG51_07210  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
HCG51_18335  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
HCG51_18385  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
HCG51_26620  ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
HCG51_27110  ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
toq00010  Glycolysis / Gluconeogenesis
toq00040  Pentose and glucuronate interconversions
toq00052  Galactose metabolism
toq00230  Purine metabolism
toq00240  Pyrimidine metabolism
toq00340  Histidine metabolism
toq00630  Glyoxylate and dicarboxylate metabolism
toq00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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