KEGG   PATHWAY: uah00515
Entry
uah00515                    Pathway                                
Name
Mannose type O-glycan biosynthesis - Ursus arctos (brown bear)
Description
Biosynthesis of mammalian O-mannosyl glycans is initiated by the transfer of mannose from mannose-P-Dol to serine or threonine residue, followed by extensions with N-acetylglucosamine (GlcNAc) and galactose (Gal) to generate core M1, M2 and M3 glycans. Core M1 and M2 glycans can then be further attached by fucose residues, sialic acid terminals and sulfatded glucuroinc acid terminals. Core M3 glycan is involved in the synthesis of alpha-dystroglycan, a heavily glycosylated protein found in muscle and brain tissues. Core M3 glycan contains a tandem repeat of ribitol 5-phosphate (Rbo5P) and -alpha3-GlcA-beta3-Xyl- repeating structures. Defects of genes encoding core glycans and modified core M3 glycans are associated with various congenital diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
uah00515  Mannose type O-glycan biosynthesis
uah00515

Module
uah_M00872  O-glycan biosynthesis, mannose type (core M3) [PATH:uah00515]
Other DBs
GO: 0035269
Organism
Ursus arctos (brown bear) [GN:uah]
Gene
113270293  POMT2; protein O-mannosyl-transferase 2 isoform X1 [KO:K00728] [EC:2.4.1.109]
113266533  POMT1; protein O-mannosyl-transferase 1 isoform X3 [KO:K00728] [EC:2.4.1.109]
113254729  POMGNT1; protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 [KO:K09666] [EC:2.4.1.-]
113260528  B4GALT1; beta-1,4-galactosyltransferase 1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
113254774  B4GALT2; beta-1,4-galactosyltransferase 2 isoform X1 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
113246729  B4GALT3; beta-1,4-galactosyltransferase 3 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
113247273  beta-1,4-galactosyltransferase 3-like [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
113254779  ST3GAL3; CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1 [KO:K00781] [EC:2.4.3.6]
113259843  B3GAT1; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 [KO:K00735] [EC:2.4.1.135]
113261131  B3GAT2; galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 [KO:K10157] [EC:2.4.1.135]
113247050  CHST10; carbohydrate sulfotransferase 10 isoform X2 [KO:K09674] [EC:2.8.2.-]
113264665  FUT9; 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9 [KO:K03663] [EC:2.4.1.152]
113260163  FUT4; alpha-(1,3)-fucosyltransferase 4 [KO:K07632] [EC:2.4.1.-]
113244582  MGAT5B; alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [KO:K09661] [EC:2.4.1.-]
113253834  POMGNT2; protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [KO:K18207] [EC:2.4.1.312]
113259001  B3GALNT2; UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2 isoform X1 [KO:K09654] [EC:2.4.1.313]
113245578  POMK; protein O-mannose kinase [KO:K17547] [EC:2.7.1.183]
113260950  CRPPA; D-ribitol-5-phosphate cytidylyltransferase isoform X1 [KO:K21031] [EC:2.7.7.40]
113260349  FKTN; ribitol-5-phosphate transferase FKTN isoform X1 [KO:K19872] [EC:2.7.8.-]
113243391  FKRP; ribitol 5-phosphate transferase FKRP [KO:K19873] [EC:2.7.8.-]
113256338  RXYLT1; ribitol-5-phosphate xylosyltransferase 1 isoform X1 [KO:K21052] [EC:2.4.2.61]
113244067  B4GAT1; beta-1,4-glucuronyltransferase 1 [KO:K21032] [EC:2.4.1.-]
113264992  LARGE2; xylosyl- and glucuronyltransferase LARGE2 isoform X2 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
113256015  LARGE1; xylosyl- and glucuronyltransferase LARGE1 [KO:K09668] [EC:2.4.2.- 2.4.1.-]
Compound
C00063  CTP
C00789  CDP-ribitol
C01068  D-Ribitol 5-phosphate
C02189  [Protein]-L-serine
G10617  Dolichyl phosphate D-mannose
G13026   
G13027   
G13028   
G13082   
G13083   
G13084  O-Mannose core M1
G13085   
G13086  O-Mannose core M2
G13087   
G13088   
G13089   
G13090   
G13091  O-mannose core M3
G13092  Phospho-core M3
G13093   
G13094   
G13095   
G13096   
G13097   
G13098   
G13099   
G13100   
Reference
  Authors
Praissman JL, Wells L
  Title
Mammalian O-mannosylation pathway: glycan structures, enzymes, and protein substrates.
  Journal
Biochemistry 53:3066-78 (2014)
DOI:10.1021/bi500153y
Reference
  Authors
Stalnaker SH, Stuart R, Wells L
  Title
Mammalian O-mannosylation: unsolved questions of structure/function.
  Journal
Curr Opin Struct Biol 21:603-9 (2011)
DOI:10.1016/j.sbi.2011.09.001
Reference
  Authors
Kanagawa M, Kobayashi K, Tajiri M, Manya H, Kuga A, Yamaguchi Y, Akasaka-Manya K, Furukawa J, Mizuno M, Kawakami H, Shinohara Y, Wada Y, Endo T, Toda T
  Title
Identification of a Post-translational Modification with Ribitol-Phosphate and Its Defect in Muscular Dystrophy.
  Journal
Cell Rep 14:2209-23 (2016)
DOI:10.1016/j.celrep.2016.02.017
Reference
  Authors
Manya H, Yamaguchi Y, Kanagawa M, Kobayashi K, Tajiri M, Akasaka-Manya K, Kawakami H, Mizuno M, Wada Y, Toda T, Endo T
  Title
The Muscular Dystrophy Gene TMEM5 Encodes a Ribitol beta1,4-Xylosyltransferase Required for the Functional Glycosylation of Dystroglycan.
  Journal
J Biol Chem 291:24618-24627 (2016)
DOI:10.1074/jbc.M116.751917
Related
pathway
uah00510  N-Glycan biosynthesis
KO pathway
ko00515   
LinkDB

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