KEGG   PATHWAY: vnp00010
Entry
vnp00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Vibrio neptunius
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
vnp00010  Glycolysis / Gluconeogenesis
vnp00010

Module
vnp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vnp00010]
vnp_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vnp00010]
vnp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vnp00010]
Other DBs
GO: 0006096 0006094
Organism
Vibrio neptunius [GN:vnp]
Gene
KW548_00340  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
KW548_00410  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
KW548_00645  gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
KW548_01010  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
KW548_01620  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
KW548_03050  [KO:K00382] [EC:1.8.1.4]
KW548_03195  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
KW548_04050  [KO:K00927] [EC:2.7.2.3]
KW548_04055  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
KW548_04090  pykF; pyruvate kinase PykF [KO:K00873] [EC:2.7.1.40]
KW548_04400  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
KW548_04405  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
KW548_04410  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KW548_05750  crr; PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
KW548_07220  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
KW548_07335  [KO:K01792] [EC:5.1.3.15]
KW548_07340  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
KW548_10765  [KO:K01007] [EC:2.7.9.2]
KW548_13645  ptsG; PTS glucose transporter subunit IIBC [KO:K02779] [EC:2.7.1.199]
KW548_14695  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
KW548_15930  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
KW548_17420  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
KW548_19050  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
KW548_20570  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
KW548_23005  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
KW548_23095  [KO:K00138] [EC:1.2.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
vnp00020  Citrate cycle (TCA cycle)
vnp00030  Pentose phosphate pathway
vnp00500  Starch and sucrose metabolism
vnp00620  Pyruvate metabolism
vnp00640  Propanoate metabolism
vnp00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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