KEGG PATHWAY: vsr00040

PATHWAY: vsr00040

Entry

vsr00040                    Pathway

Name

Pentose and glucuronate interconversions - Vibrio spartinae

Class

Metabolism; Carbohydrate metabolism

Pathway map

vsr00040

Pentose and glucuronate interconversions

Module

vsr_M00061

D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde-3P [PATH:vsr00040]

vsr_M00631

D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde-3P [PATH:vsr00040]

Organism

Vibrio spartinae [GN:vsr]

Gene

Vspart_00160

ugd; UDP-glucose 6-dehydrogenase [KO:K00012] [EC:1.1.1.22]

Vspart_00306

rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]

Vspart_00567

dlgD; 2,3-diketo-L-gulonate reductase [KO:K08092] [EC:1.1.1.130]

Vspart_00571

araD; L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]

Vspart_00572

lyx; L-xylulose/3-keto-L-gulonate kinase [KO:K00880] [EC:2.7.1.53]

Vspart_00573

sgbH_1; 3-keto-L-gulonate-6-phosphate decarboxylase SgbH [KO:K03078] [EC:4.1.1.85]

Vspart_00575

ulaE_1; L-ribulose-5-phosphate 3-epimerase UlaE [KO:K03079] [EC:5.1.3.22]

Vspart_00802

ulaE_2; L-ribulose-5-phosphate 3-epimerase UlaE [KO:K03079] [EC:5.1.3.22]

Vspart_00803

sgbH_2; 3-keto-L-gulonate-6-phosphate decarboxylase SgbH [KO:K03078] [EC:4.1.1.85]

Vspart_00805

ulaF_1; L-ribulose-5-phosphate 4-epimerase UlaF [KO:K03077] [EC:5.1.3.4]

Vspart_00856

uxaB; Altronate oxidoreductase [KO:K00041] [EC:1.1.1.58]

Vspart_00857

uxaA; Altronate dehydratase [KO:K01685] [EC:4.2.1.7]

Vspart_02202

pel; Pectate trisaccharide-lyase precursor [KO:K01728] [EC:4.2.2.2]

Vspart_02698

kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [KO:K00065] [EC:1.1.1.127]

Vspart_02699

[KO:K26933]

Vspart_02703

pelW; Pectate disaccharide-lyase [KO:K01731] [EC:4.2.2.9]

Vspart_02709

pelX; Pectate disaccharide-lyase precursor [KO:K22994]

Vspart_02711

ogl; Oligogalacturonate lyase [KO:K01730] [EC:4.2.2.6]

Vspart_02925

uxuA; Mannonate dehydratase [KO:K01686] [EC:4.2.1.8]

Vspart_02931

por_1; Polyol:NADP oxidoreductase [KO:K00040] [EC:1.1.1.57]

Vspart_02932

uxaC; Uronate isomerase [KO:K01812] [EC:5.3.1.12]

Vspart_02990

gtaB; UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]

Vspart_03301

araA; L-arabinose isomerase [KO:K01804] [EC:5.3.1.4]

Vspart_03304

araB; Ribulokinase [KO:K00853] [EC:2.7.1.16]

Vspart_03370

fucA; L-fuculose phosphate aldolase [KO:K01628] [EC:4.1.2.17]

Vspart_03580

yjmD; putative zinc-type alcohol dehydrogenase-like protein YjmD [KO:K08322] [EC:1.1.1.380]

Vspart_03582

rspA; Starvation-sensing protein RspA [KO:K08323] [EC:4.2.1.8]

Vspart_03583

por_2; Polyol:NADP oxidoreductase [KO:K00040] [EC:1.1.1.57]

Vspart_04020

pemA; Pectinesterase A precursor [KO:K01051] [EC:3.1.1.11]

Vspart_04134

xylB_2; Xylulose kinase [KO:K00854] [EC:2.7.1.17]

Vspart_04137

xylA; Xylose isomerase [KO:K01805] [EC:5.3.1.5]

Compound

C00022

Pyruvate

C00026

2-Oxoglutarate

C00029

UDP-glucose

C00103

D-Glucose 1-phosphate

C00111

Glycerone phosphate

C00116

Glycerol

C00167

UDP-glucuronate

C00181

D-Xylose

C00191

D-Glucuronate

C00199

D-Ribulose 5-phosphate

C00204

2-Dehydro-3-deoxy-D-gluconate

C00216

D-Arabinose

C00231

D-Xylulose 5-phosphate

C00259

L-Arabinose

C00266

Glycolaldehyde

C00309

D-Ribulose

C00310

D-Xylulose

C00312

L-Xylulose

C00333

D-Galacturonate

C00379

Xylitol

C00433

2,5-Dioxopentanoate

C00470

Pectate

C00474

Ribitol

C00476

D-Lyxose

C00502

D-Xylonate

C00508

L-Ribulose

C00514

D-Mannonate

C00532

L-Arabitol

C00558

D-Tagaturonate

C00618

3-Dehydro-L-gulonate

C00714

Pectin

C00789

CDP-ribitol

C00800

L-Gulonate

C00817

D-Altronate

C00905

D-Fructuronate

C01068

D-Ribitol 5-phosphate

C01101

L-Ribulose 5-phosphate

C01508

L-Lyxose

C01904

D-Arabitol

C02266

D-Xylonolactone

C02273

Digalacturonate

C02426

L-Glyceraldehyde

C02753

D-Xylono-1,4-lactone

C03033

beta-D-Glucuronoside

C03291

L-Xylulose 5-phosphate

C03826

2-Dehydro-3-deoxy-D-xylonate

C04053

5-Dehydro-4-deoxy-D-glucuronate

C04349

(4S)-4,6-Dihydroxy-2,5-dioxohexanoate

C04575

(4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate

C05385

D-Glucuronate 1-phosphate

C05411

L-Xylonate

C05412

L-Lyxonate

C06118

4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate

C06441

L-Xylulose 1-phosphate

C14899

3-Dehydro-L-gulonate 6-phosphate

C15930

L-Galactonate

C20680

2-Dehydro-3-deoxy-L-galactonate

C20902

3,6-Anhydro-alpha-L-galactopyranose

C20903

3,6-Anhydro-L-galactonate

C22337

D-Ribulose 1-phosphate

C22712

4-Deoxy-L-threo-hex-4-enopyranuronate

Reference

PMID:11741871

Authors

Yew WS, Gerlt JA.

Title

Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.

Journal

J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002

Reference

PMID:15697206

Authors

Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA

Title

Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.

Journal

Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v

Reference

PMID:10572115

Authors

Yasueda H, Kawahara Y, Sugimoto S.

Title

Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.

Journal

J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999

Reference

PMID:10913097

Authors

Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J

Title

Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.

Journal

J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000

Reference

PMID:15901685