KEGG   PATHWAY: xbv00010
Entry
xbv00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Xenorhabdus bovienii CS03
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
xbv00010  Glycolysis / Gluconeogenesis
xbv00010

Module
xbv_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xbv00010]
xbv_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:xbv00010]
xbv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xbv00010]
Other DBs
GO: 0006096 0006094
Organism
Xenorhabdus bovienii CS03 [GN:xbv]
Gene
XBW1_4126  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
XBW1_4649  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
XBW1_4437  fbp; Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
XBW1_2417  fbaB; Fructose-bisphosphate aldolase class 1 [KO:K11645] [EC:4.1.2.13]
XBW1_1442  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
XBW1_4647  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
XBW1_2244  gapA; Glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
XBW1_1441  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
XBW1_3477  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
XBW1_1103  gpmB; putative phosphoglycerate mutase gpmB [KO:K15634] [EC:5.4.2.11]
XBW1_3956  eno; Enolase [KO:K01689] [EC:4.2.1.11]
XBW1_1952  pykA; Pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
XBW1_2986  pykF; Pyruvate kinase I [KO:K00873] [EC:2.7.1.40]
XBW1_2993  ppsA; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
XBW1_3891  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
XBW1_3890  aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
XBW1_3889  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
XBW1_4096  frmA; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
XBW1_2223  adhE; Aldehyde-alcohol dehydrogenase [Includes: Alcohol dehydrogenase; Acetaldehyde dehydrogenase [acetylating]; Pyruvate-formate-lyase deactivase] [KO:K04072] [EC:1.2.1.10 1.1.1.1]
XBW1_3379  yiaY; putative alcohol dehydrogenase [KO:K13954] [EC:1.1.1.1]
XBW1_3954  aldA; putative aldehyde dehydrogenase AldA [KO:K00128] [EC:1.2.1.3]
XBW1_0052  acs; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
XBW1_0277  yihX; Phosphatase yihX [KO:K20866] [EC:3.1.3.10]
XBW1_3512  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
XBW1_2245  yeaD; putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
XBW1_0074  pckA; Phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
XBW1_4239  licH; putative 6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
XBW1_1812  crr; Glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
xbv00020  Citrate cycle (TCA cycle)
xbv00030  Pentose phosphate pathway
xbv00500  Starch and sucrose metabolism
xbv00620  Pyruvate metabolism
xbv00640  Propanoate metabolism
xbv00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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