KEGG   PATHWAY: xcc00260
Entry
xcc00260                    Pathway                                
Name
Glycine, serine and threonine metabolism - Xanthomonas campestris pv. campestris ATCC 33913
Description
Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].
Class
Metabolism; Amino acid metabolism
Pathway map
xcc00260  Glycine, serine and threonine metabolism
xcc00260

Module
xcc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:xcc00260]
xcc_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xcc00260]
xcc_M00555  Betaine biosynthesis, choline => betaine [PATH:xcc00260]
xcc_M00621  Glycine cleavage system [PATH:xcc00260]
Other DBs
GO: 0006544 0006563 0070178 0006566
Organism
Xanthomonas campestris pv. campestris ATCC 33913 [GN:xcc]
Gene
XCC1800  metL; bifunctional aspartokinase/homoserine dehydrogenase I [KO:K12524] [EC:2.7.2.4 1.1.1.3]
XCC2741  lysA; bifunctional diaminopimelate decarboxylase/aspartate kinase [KO:K12526] [EC:4.1.1.20 2.7.2.4]
XCC2549  asd; aspartate semialdehyde dehydrogenase [KO:K00133] [EC:1.2.1.11]
XCC2855  homoserine dehydrogenase [KO:K00003] [EC:1.1.1.3]
XCC1801  thrB; homoserine kinase [KO:K00872] [EC:2.7.1.39]
XCC1803  thrC; threonine synthase [KO:K01733] [EC:4.2.3.1]
XCC0460  threonine aldolase [KO:K01620] [EC:4.1.2.48]
XCC0690  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
XCC2550  2-hydroxyacid dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
XCC4226  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
XCC2712  gpm; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
XCC0747  phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
XCC1825  serA; D-3-phosphoglycerate dehydrogenase [KO:K00058] [EC:1.1.1.95 1.1.1.399]
XCC0020  serA; D-3-phosphoglycerate dehydrogenase [KO:K00058] [EC:1.1.1.95 1.1.1.399]
XCC1589  serC; phosphoserine aminotransferase [KO:K00831] [EC:2.6.1.52]
XCC0939  kbl; 2-amino-3-ketobutyrate CoA ligase [KO:K00639] [EC:2.3.1.29]
XCC0945  tdh; threonine 3-dehydrogenase [KO:K00060] [EC:1.1.1.103]
XCC3278  flavin monoamine oxidase-related protein [KO:K00274] [EC:1.4.3.4]
XCC1112  gcvP; glycine decarboxylase [KO:K00281] [EC:1.4.4.2]
XCC2877  gcvT; glycine cleavage T protein [KO:K00605] [EC:2.1.2.10]
XCC0544  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
XCC1485  ldp; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
XCC2876  gcvH; glycine cleavage H protein [KO:K02437]
XCC2161  pssA; CDP-diacylglycerol-serine o-phosphatidyltransferase [KO:K17103] [EC:2.7.8.8]
XCC0641  pssA; phosphatidylserine synthase [KO:K17103] [EC:2.7.8.8]
XCC3404  betA; choline dehydrogenase [KO:K00108] [EC:1.1.99.1]
XCC3403  betB; betaine aldehyde dehydrogenase [KO:K00130] [EC:1.2.1.8]
XCC0597  cysB; cystathionine beta-synthase [KO:K01697] [EC:4.2.1.22]
XCC0598  metB; cystathionine gamma-lyase-like protein [KO:K01758] [EC:4.4.1.1]
XCC2853  sdaA; L-serine dehydratase [KO:K01752] [EC:4.3.1.17]
XCC3326  tdcB; threonine dehydratase catabolic [KO:K01754] [EC:4.3.1.19]
XCC0379  ilvA; threonine dehydratase [KO:K01754] [EC:4.3.1.19]
XCC1785  ygeA; putative resistance protein [KO:K25316] [EC:5.1.1.10]
XCC2541  trpA; tryptophan synthase alpha chain [KO:K01695] [EC:4.2.1.20]
XCC2543  trpB; tryptophan synthase beta chain [KO:K01696] [EC:4.2.1.20]
Compound
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00037  Glycine
C00048  Glyoxylate
C00049  L-Aspartate
C00065  L-Serine
C00078  L-Tryptophan
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00109  2-Oxobutanoate
C00114  Choline
C00143  5,10-Methylenetetrahydrofolate
C00168  Hydroxypyruvate
C00188  L-Threonine
C00197  3-Phospho-D-glycerate
C00213  Sarcosine
C00258  D-Glycerate
C00263  L-Homoserine
C00300  Creatine
C00430  5-Aminolevulinate
C00441  L-Aspartate 4-semialdehyde
C00546  Methylglyoxal
C00576  Betaine aldehyde
C00581  Guanidinoacetate
C00631  2-Phospho-D-glycerate
C00719  Betaine
C00740  D-Serine
C00986  1,3-Diaminopropane
C01005  O-Phospho-L-serine
C01026  N,N-Dimethylglycine
C01102  O-Phospho-L-homoserine
C01242  [Protein]-S8-aminomethyldihydrolipoyllysine
C01888  Aminoacetone
C02051  Lipoylprotein
C02291  L-Cystathionine
C02737  Phosphatidylserine
C02972  Dihydrolipoylprotein
C03082  4-Phospho-L-aspartate
C03194  (R)-1-Aminopropan-2-ol
C03232  3-Phosphonooxypyruvate
C03283  L-2,4-Diaminobutanoate
C03508  L-2-Amino-3-oxobutanoic acid
C05519  L-Allothreonine
C06231  Ectoine
C06442  N(gamma)-Acetyldiaminobutyrate
C16432  5-Hydroxyectoine
C19929  N(alpha)-Acetyl-L-2,4-diaminobutyrate
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
PMID:11823218
  Authors
Kuhlmann AU, Bremer E.
  Title
Osmotically regulated synthesis of the compatible solute ectoine in Bacillus pasteurii and related Bacillus spp.
  Journal
Appl Environ Microbiol 68:772-83 (2002)
DOI:10.1128/AEM.68.2.772-783.2002
Reference
PMID:10473374
  Authors
Canovas D, Borges N, Vargas C, Ventosa A, Nieto JJ, Santos H.
  Title
Role of Ngamma-acetyldiaminobutyrate as an enzyme stabilizer and an intermediate in the biosynthesis of hydroxyectoine.
  Journal
Appl Environ Microbiol 65:3774-9 (1999)
DOI:10.1128/AEM.65.9.3774-3779.1999
Reference
PMID:17636255
  Authors
Bursy J, Pierik AJ, Pica N, Bremer E.
  Title
Osmotically induced synthesis of the compatible solute hydroxyectoine is mediated by an evolutionarily conserved ectoine hydroxylase.
  Journal
J Biol Chem 282:31147-55 (2007)
DOI:10.1074/jbc.M704023200
Reference
PMID:16707670
  Authors
Garcia-Estepa R, Argandona M, Reina-Bueno M, Capote N, Iglesias-Guerra F, Nieto JJ, Vargas C.
  Title
The ectD gene, which is involved in the synthesis of the compatible solute hydroxyectoine, is essential for thermoprotection of the halophilic bacterium Chromohalobacter salexigens.
  Journal
J Bacteriol 188:3774-84 (2006)
DOI:10.1128/JB.00136-06
Reference
PMID:15470257
  Authors
Arevalo-Rodriguez M, Pan X, Boeke JD, Heitman J
  Title
FKBP12 controls aspartate pathway flux in Saccharomyces cerevisiae to prevent toxic intermediate accumulation.
  Journal
Eukaryot Cell 3:1287-96 (2004)
DOI:10.1128/EC.3.5.1287-1296.2004
Reference
PMID:7639721
  Authors
Rees WD, Hay SM
  Title
The biosynthesis of threonine by mammalian cells: expression of a complete bacterial biosynthetic pathway in an animal cell.
  Journal
Biochem J 309 ( Pt 3):999-1007 (1995)
DOI:10.1042/bj3090999
Reference
PMID:11341914
  Authors
Jacques SL, Nieman C, Bareich D, Broadhead G, Kinach R, Honek JF, Wright GD
  Title
Characterization of yeast homoserine dehydrogenase, an antifungal target: the invariant histidine 309 is important for enzyme integrity.
  Journal
Biochim Biophys Acta 1544:28-41 (2001)
DOI:10.1016/S0167-4838(00)00203-X
Reference
PMID:15520012
  Authors
Chen X, Jhee KH, Kruger WD
  Title
Production of the neuromodulator H2S by cystathionine beta-synthase via the condensation of cysteine and homocysteine.
  Journal
J Biol Chem 279:52082-6 (2004)
DOI:10.1074/jbc.C400481200
Related
pathway
xcc00010  Glycolysis / Gluconeogenesis
xcc00020  Citrate cycle (TCA cycle)
xcc00230  Purine metabolism
xcc00250  Alanine, aspartate and glutamate metabolism
xcc00270  Cysteine and methionine metabolism
xcc00290  Valine, leucine and isoleucine biosynthesis
xcc00300  Lysine biosynthesis
xcc00330  Arginine and proline metabolism
xcc00460  Cyanoamino acid metabolism
xcc00470  D-Amino acid metabolism
xcc00564  Glycerophospholipid metabolism
xcc00600  Sphingolipid metabolism
xcc00620  Pyruvate metabolism
xcc00630  Glyoxylate and dicarboxylate metabolism
xcc00640  Propanoate metabolism
xcc00680  Methane metabolism
xcc00860  Porphyrin metabolism
xcc00920  Sulfur metabolism
KO pathway
ko00260   
LinkDB

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