KEGG   PATHWAY: xcj00010
Entry
xcj00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Xanthomonas citri subsp. citri UI6
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
xcj00010  Glycolysis / Gluconeogenesis
xcj00010

Module
xcj_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xcj00010]
xcj_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xcj00010]
xcj_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xcj00010]
Other DBs
GO: 0006096 0006094
Organism
Xanthomonas citri subsp. citri UI6 [GN:xcj]
Gene
J158_03235  glucokinase [KO:K00845] [EC:2.7.1.2]
J158_03281  glucokinase [KO:K00845] [EC:2.7.1.2]
J158_02218  glucokinase [KO:K00845] [EC:2.7.1.2]
J158_01933  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
J158_03600  pyrophosphate-dependent phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
J158_00236  D-fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
J158_03507  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
J158_02874  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
J158_03515  glyceraldehyde-3-phosphate dehydrogenase (NAD+) [KO:K00134] [EC:1.2.1.12]
J158_03510  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
J158_03044  phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
J158_01861  enolase [KO:K01689] [EC:4.2.1.11]
J158_03508  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
J158_02189  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
J158_00695  pyruvate dehydrogenase E1 component, homodimeric type [KO:K00163] [EC:1.2.4.1]
J158_03822  Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component [KO:K00627] [EC:2.3.1.12]
J158_01681  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
J158_03820  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
J158_00854  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
J158_00770  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
J158_02995  Zn-dependent alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
J158_00142  Zn-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
J158_04373  NAD-dependent aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
J158_01006  NAD-dependent aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
J158_00241  NAD-dependent aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
J158_04312  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
J158_01425  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
J158_03590  haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [KO:K20866] [EC:3.1.3.10]
J158_04067  Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
J158_03740  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
J158_04429  lytic murein transglycosylase [KO:K01792] [EC:5.1.3.15]
J158_03246  Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase [KO:K01222] [EC:3.2.1.86]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
xcj00020  Citrate cycle (TCA cycle)
xcj00030  Pentose phosphate pathway
xcj00500  Starch and sucrose metabolism
xcj00620  Pyruvate metabolism
xcj00640  Propanoate metabolism
xcj00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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