KEGG   PATHWAY: xhd00010
Entry
xhd00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Xanthomonas hydrangeae
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
xhd00010  Glycolysis / Gluconeogenesis
xhd00010

Module
xhd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xhd00010]
xhd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xhd00010]
xhd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xhd00010]
Other DBs
GO: 0006096 0006094
Organism
Xanthomonas hydrangeae [GN:xhd]
Gene
LMG31886_00310  yahK; Aldehyde reductase YahK [KO:K13979] [EC:1.1.1.2]
LMG31886_01000  fbp; Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
LMG31886_01060  acoD; Acetaldehyde dehydrogenase 2 [KO:K00138] [EC:1.2.1.-]
LMG31886_06690  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
LMG31886_07680  frmA_1; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
LMG31886_08560  frmA_2; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
LMG31886_09370  pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
LMG31886_09530  [KO:K20866] [EC:3.1.3.10]
LMG31886_10340  gapA; Glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
LMG31886_10380  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
LMG31886_10400  pykA; Pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
LMG31886_10410  fda; Fructose-bisphosphate aldolase class 1 [KO:K01623] [EC:4.1.2.13]
LMG31886_12290  glk_1; Glucokinase [KO:K00845] [EC:2.7.1.2]
LMG31886_12670  licH; putative 6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
LMG31886_12780  glk_2; Glucokinase [KO:K00845] [EC:2.7.1.2]
LMG31886_14720  gpmA_1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
LMG31886_16390  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
LMG31886_19970  ppsA; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
LMG31886_20260  glk_3; Glucokinase [KO:K00845] [EC:2.7.1.2]
LMG31886_25190  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
LMG31886_25900  eno; Enolase [KO:K01689] [EC:4.2.1.11]
LMG31886_27950  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LMG31886_30420  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
LMG31886_34610  geoB; Geranial dehydrogenase [KO:K00128] [EC:1.2.1.3]
LMG31886_36700  algC; Phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
LMG31886_37460  sthA; Soluble pyridine nucleotide transhydrogenase [KO:K00382] [EC:1.8.1.4]
LMG31886_37480  [KO:K00627] [EC:2.3.1.12]
LMG31886_40480  glmM_2; Phosphoglucosamine mutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
LMG31886_42790  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
LMG31886_43930  [KO:K01792] [EC:5.1.3.15]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
xhd00020  Citrate cycle (TCA cycle)
xhd00030  Pentose phosphate pathway
xhd00500  Starch and sucrose metabolism
xhd00620  Pyruvate metabolism
xhd00640  Propanoate metabolism
xhd00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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