KEGG   PATHWAY: xyg00010
Entry
xyg00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Xylophilus sp. GOD-11R
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
xyg00010  Glycolysis / Gluconeogenesis
xyg00010

Module
xyg_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xyg00010]
xyg_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:xyg00010]
xyg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xyg00010]
Other DBs
GO: 0006096 0006094
Organism
Xylophilus sp. GOD-11R [GN:xyg]
Gene
R9X41_00080  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
R9X41_00250  [KO:K01596] [EC:4.1.1.32]
R9X41_00560  [KO:K00927] [EC:2.7.2.3]
R9X41_00570  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
R9X41_01465  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
R9X41_02470  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
R9X41_02800  [KO:K01792] [EC:5.1.3.15]
R9X41_05680  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
R9X41_05940  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
R9X41_06545  [KO:K00128] [EC:1.2.1.3]
R9X41_07465  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
R9X41_07470  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
R9X41_07480  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
R9X41_07695  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
R9X41_07875  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
R9X41_09405  adh; aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
R9X41_10700  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
R9X41_13095  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
R9X41_14440  [KO:K03841] [EC:3.1.3.11]
R9X41_16930  [KO:K22474] [EC:1.1.5.5]
R9X41_17125  [KO:K13979] [EC:1.1.1.2]
R9X41_17555  [KO:K15634] [EC:5.4.2.11]
R9X41_18380  [KO:K13979] [EC:1.1.1.2]
R9X41_20370  [KO:K00845] [EC:2.7.1.2]
R9X41_20430  [KO:K15634] [EC:5.4.2.11]
R9X41_20915  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
R9X41_22945  fba; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
R9X41_23390  [KO:K13979] [EC:1.1.1.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
xyg00020  Citrate cycle (TCA cycle)
xyg00030  Pentose phosphate pathway
xyg00500  Starch and sucrose metabolism
xyg00620  Pyruvate metabolism
xyg00640  Propanoate metabolism
xyg00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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