KEGG   PATHWAY: xyk00010
Entry
xyk00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Xylophilus rhododendri
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
xyk00010  Glycolysis / Gluconeogenesis
xyk00010

Module
xyk_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xyk00010]
xyk_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:xyk00010]
xyk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xyk00010]
Other DBs
GO: 0006096 0006094
Organism
Xylophilus rhododendri [GN:xyk]
Gene
GT347_03765  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GT347_03775  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
GT347_03780  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
GT347_04490  [KO:K01689] [EC:4.2.1.11]
GT347_04965  [KO:K03841] [EC:3.1.3.11]
GT347_06370  [KO:K00128] [EC:1.2.1.3]
GT347_07370  [KO:K15634] [EC:5.4.2.11]
GT347_09435  [KO:K01792] [EC:5.1.3.15]
GT347_09780  [KO:K01810] [EC:5.3.1.9]
GT347_10560  [KO:K00845] [EC:2.7.1.2]
GT347_10605  [KO:K15634] [EC:5.4.2.11]
GT347_12425  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GT347_12435  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GT347_12680  [KO:K01596] [EC:4.1.1.32]
GT347_12830  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
GT347_13055  [KO:K13979] [EC:1.1.1.2]
GT347_13625  [KO:K01624] [EC:4.1.2.13]
GT347_16465  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
GT347_17000  [KO:K01834] [EC:5.4.2.11]
GT347_17840  [KO:K00128] [EC:1.2.1.3]
GT347_19185  [KO:K13979] [EC:1.1.1.2]
GT347_21775  [KO:K13953] [EC:1.1.1.1]
GT347_22765  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
GT347_23365  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
GT347_23540  [KO:K00138] [EC:1.2.1.-]
GT347_23570  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
GT347_23890  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GT347_24990  [KO:K00128] [EC:1.2.1.3]
GT347_26170  [KO:K01803] [EC:5.3.1.1]
GT347_26885  [KO:K22474] [EC:1.1.5.5]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
xyk00020  Citrate cycle (TCA cycle)
xyk00030  Pentose phosphate pathway
xyk00500  Starch and sucrose metabolism
xyk00620  Pyruvate metabolism
xyk00640  Propanoate metabolism
xyk00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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