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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:nvn03030]
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 NVIE_003150 UPF0095 protein
NVIE_002190 rnhA; ribonuclease H
NVIE_017440 rnhB; ribonuclease HII
NVIE_016860 dpo; DNA polymerase, family B
NVIE_020490 polB; DNA polymerase II small subunit
NVIE_020540 polC; DNA polymerase II large subunit
NVIE_013400 mcm; minichromosome maintenance complex protein
NVIE_005900 priA; DNA primase, small subunit
NVIE_005890 priB; DNA primase, large subunit
NVIE_027080 pcn; DNA polymerase sliding clamp
NVIE_013420 rfcS; replication factor C small subunit
NVIE_013670 rfcL; replication factor C large subunit
NVIE_002910 fen; flap structure-specific endonuclease
NVIE_008430 lig; DNA ligase
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K02316 dnaG; DNA primase [EC:2.7.7.101]
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
K02683 priS; DNA primase small subunit [EC:2.7.7.102]
K18882 priL; DNA primase large subunit
K04802 PCNA; proliferating cell nuclear antigen
K04801 rfcS; replication factor C small subunit
K04800 rfcL; replication factor C large subunit
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
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03410 Base excision repair [PATH:nvn03410]
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NVIE_002460 ogg; 8-oxoguanine DNA glycosylase
NVIE_012760 putative endonuclease III
NVIE_001240 putative HhH-GPD superfamily base excision DNA repair protein
NVIE_002380 putative 3-methyladenine DNA glycosylase
NVIE_027080 pcn; DNA polymerase sliding clamp
NVIE_002910 fen; flap structure-specific endonuclease
NVIE_008430 lig; DNA ligase
NVIE_025180 putative DNA-3-methyladenine glycosylase II
NVIE_002390 putative uracil DNA glycosylase superfamily protein
NVIE_020400 uracil-DNA glycosylase
NVIE_005880 nfo; putative endonuclease 4
NVIE_010490 putative phosphoesterase, DHHA1
NVIE_004570 hypothetical protein
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K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
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03420 Nucleotide excision repair [PATH:nvn03420]
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NVIE_011140 uvrA; excinuclease ABC, A subunit
NVIE_011130 uvrB; excinuclease ABC, B subunit
NVIE_011150 uvrC; excinuclease ABC, C subunit
NVIE_009140 uvrD; putative UvrD/REP helicase
NVIE_008470 rpoK; DNA-directed RNA polymerase subunit K
NVIE_000300 xpf; putative DNA repair nuclease XPF
NVIE_027080 pcn; DNA polymerase sliding clamp
NVIE_008430 lig; DNA ligase
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K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K04802 PCNA; proliferating cell nuclear antigen
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
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03430 Mismatch repair [PATH:nvn03430]
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NVIE_009140 uvrD; putative UvrD/REP helicase
NVIE_010490 putative phosphoesterase, DHHA1
NVIE_004570 hypothetical protein
NVIE_010130 DNA adenine methylase
NVIE_027080 pcn; DNA polymerase sliding clamp
NVIE_008430 lig; DNA ligase
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K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K04802 PCNA; proliferating cell nuclear antigen
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
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03440 Homologous recombination
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:nvn03000]
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03021 Transcription machinery [BR:nvn03021]
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03019 Messenger RNA biogenesis [BR:nvn03019]
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03041 Spliceosome
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03011 Ribosome [BR:nvn03011]
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03009 Ribosome biogenesis [BR:nvn03009]
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03016 Transfer RNA biogenesis [BR:nvn03016]
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03012 Translation factors [BR:nvn03012]
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03110 Chaperones and folding catalysts [BR:nvn03110]
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04131 Membrane trafficking [BR:nvn04131]
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04121 Ubiquitin system [BR:nvn04121]
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03051 Proteasome [BR:nvn03051]
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03032 DNA replication proteins [BR:nvn03032]
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NVIE_002190 rnhA; ribonuclease H
NVIE_027080 pcn; DNA polymerase sliding clamp
NVIE_002910 fen; flap structure-specific endonuclease
NVIE_008430 lig; DNA ligase
NVIE_001230 C-5 cytosine-specific DNA methylase
NVIE_004420 nop; putative ribosome biogenesis protein Nop10
NVIE_013850 truB; tRNA pseudouridine synthase B
NVIE_000300 xpf; putative DNA repair nuclease XPF
NVIE_015110 topoI; DNA topoisomerase IB
NVIE_003150 UPF0095 protein
NVIE_020500 cdc6-3; cell division control protein 6
NVIE_009210 cdc6-2; putative cell division control protein 6
NVIE_0556 cdc6-1; putative cell division control protein 6
NVIE_021430 cdc6-4; Cell division control protein 6 family protein
NVIE_013400 mcm; minichromosome maintenance complex protein
NVIE_005900 priA; DNA primase, small subunit
NVIE_005890 priB; DNA primase, large subunit
NVIE_018540 hypothetical protein
NVIE_013410 hypothetical protein
NVIE_017440 rnhB; ribonuclease HII
NVIE_016860 dpo; DNA polymerase, family B
NVIE_020540 polC; DNA polymerase II large subunit
NVIE_020490 polB; DNA polymerase II small subunit
NVIE_013670 rfcL; replication factor C large subunit
NVIE_013420 rfcS; replication factor C small subunit
NVIE_010130 DNA adenine methylase
NVIE_028330 top6A; Topoisomerase IIB, subunitA
NVIE_028340 top6B; putative topoisomerase IIB, subunitB
NVIE_020340 topA; DNA topoisomerase IA
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K03163 TOP1; DNA topoisomerase I [EC:5.6.2.1]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K10725 cdc6A; archaeal cell division control protein 6
K10725 cdc6A; archaeal cell division control protein 6
K10725 cdc6A; archaeal cell division control protein 6
K10725 cdc6A; archaeal cell division control protein 6
K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
K02683 priS; DNA primase small subunit [EC:2.7.7.102]
K18882 priL; DNA primase large subunit
K09723 ginS; DNA replication factor GINS
K09723 ginS; DNA replication factor GINS
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
K04800 rfcL; replication factor C large subunit
K04801 rfcS; replication factor C small subunit
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:nvn03036]
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03400 DNA repair and recombination proteins [BR:nvn03400]
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NVIE_000690 putative methylated-DNA--protein-cysteine methyltransferase
NVIE_002380 putative 3-methyladenine DNA glycosylase
NVIE_001240 putative HhH-GPD superfamily base excision DNA repair protein
NVIE_002460 ogg; 8-oxoguanine DNA glycosylase
NVIE_012760 putative endonuclease III
NVIE_027080 pcn; DNA polymerase sliding clamp
NVIE_002910 fen; flap structure-specific endonuclease
NVIE_008430 lig; DNA ligase
NVIE_008470 rpoK; DNA-directed RNA polymerase subunit K
NVIE_000300 xpf; putative DNA repair nuclease XPF
NVIE_025520 cdvC; AAA-type ATPase domain-containing putative archaeal cell division protein Vps4 (cdvC)
NVIE_012410 nudF; putative NUDIX hydrolase
NVIE_022010 ada; fused DNA-binding transcriptional dual regulator; O6-methylguanine-DNA methyltransferase
NVIE_002390 putative uracil DNA glycosylase superfamily protein
NVIE_020400 uracil-DNA glycosylase
NVIE_025180 putative DNA-3-methyladenine glycosylase II
NVIE_005880 nfo; putative endonuclease 4
NVIE_022520 nfi; endonuclease V
NVIE_010490 putative phosphoesterase, DHHA1
NVIE_004570 hypothetical protein
NVIE_011140 uvrA; excinuclease ABC, A subunit
NVIE_011130 uvrB; excinuclease ABC, B subunit
NVIE_011150 uvrC; excinuclease ABC, C subunit
NVIE_009140 uvrD; putative UvrD/REP helicase
NVIE_010130 DNA adenine methylase
NVIE_016790 putative DNA double-strand break repair Rad50 ATPase
NVIE_016800 putative DNA double-strand break repair protein Mre11
NVIE_025800 cas1-2; CRISPR-associated protein, Cas1 family
NVIE_017320 cas1-1; CRISPR-associated protein, Cas1 family
NVIE_005410 radA2; DNA repair and recombination protein RadA
NVIE_028440 radA3; DNA repair and recombination protein RadA
NVIE_016830 DUF87 domain-containing protein
NVIE_016840 hypothetical protein
NVIE_013380 ski2-like helicase
NVIE_020340 topA; DNA topoisomerase IA
NVIE_002150 dbh1; DNA polymerase IV with DUF72 domain
NVIE_003510 dbh2; DNA polymerase IV
NVIE_018470 polX; DNA polymerase X family
NVIE_003490 xpd; putative DNA repair helicase XPD
NVIE_024750 ATP-dependent helicase
NVIE_020270 nrdZ; ribonucleoside-diphosphate reductase
NVIE_0323 DUF650 and DUF651 domain-containing protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
K12196 VPS4; vacuolar protein-sorting-associated protein 4
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K04483 radA; DNA repair protein RadA
K04483 radA; DNA repair protein RadA
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-]
K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]
K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K22585 nreA; DNA repair protein NreA
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03029 Mitochondrial biogenesis [BR:nvn03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Nitrososphaera viennensis