KEGG   PATHWAY: biu04360
Entry
biu04360                    Pathway                                
Name
Axon guidance - Bos indicus (zebu cattle)
Description
Axon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are read by growth cone receptors, and signal transduction pathways downstream of these receptors converge onto the Rho GTPases to elicit changes in cytoskeletal organization that determine which way the growth cone will turn.
Class
Organismal Systems; Development and regeneration
Pathway map
biu04360  Axon guidance
biu04360

Other DBs
GO: 0007411
Organism
Bos indicus (zebu cattle) [GN:biu]
Gene
109566563  NTNG2; netrin-G2 [KO:K16359]
109570005  LRRC4C; leucine-rich repeat-containing protein 4C [KO:K07523]
109557835  LRRC4; leucine-rich repeat-containing protein 4 [KO:K16351]
109574337  NTN1; netrin-1 [KO:K06843]
109559402  NTN4; netrin-4 isoform X1 [KO:K06845]
109577700  DCC; netrin receptor DCC [KO:K06765]
109567698  PLCG1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 [KO:K01116] [EC:3.1.4.11]
109572707  PLCG2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 isoform X1 [KO:K05859] [EC:3.1.4.11]
109563182  TRPC1; short transient receptor potential channel 1 [KO:K04964]
109571537  TRPC3; short transient receptor potential channel 3 [KO:K04966]
109566764  TRPC4; short transient receptor potential channel 4 [KO:K04967]
109555515  TRPC5; short transient receptor potential channel 5 [KO:K04968]
109569956  TRPC6; short transient receptor potential channel 6 [KO:K04969]
109563107  PPP3CC; serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
109553732  PPP3CB; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
109560300  PPP3CA; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X1 [KO:K04348] [EC:3.1.3.16]
109566227  PPP3R1; calcineurin subunit B type 1 [KO:K06268]
109563306  PPP3R2; calcineurin subunit B type 2 [KO:K06268]
109567554  NFATC2; nuclear factor of activated T-cells, cytoplasmic 2 isoform X1 [KO:K17332]
109572084  NFATC3; nuclear factor of activated T-cells, cytoplasmic 3 isoform X1 [KO:K17333]
109564198  NFATC4; LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 4 [KO:K17334]
109568429  PTK2; LOW QUALITY PROTEIN: focal adhesion kinase 1 [KO:K05725] [EC:2.7.10.2]
109563811  FYN; tyrosine-protein kinase Fyn isoform X1 [KO:K05703] [EC:2.7.10.2]
109567428  SRC; proto-oncogene tyrosine-protein kinase Src [KO:K05704] [EC:2.7.10.2]
109578192  RAC1; ras-related C3 botulinum toxin substrate 1 [KO:K04392]
109559531  RAC2; ras-related C3 botulinum toxin substrate 2 [KO:K07860]
109574290  RAC3; ras-related C3 botulinum toxin substrate 3 [KO:K07861]
109574100  CDC42; cell division control protein 42 homolog [KO:K04393]
109579021  ABLIM1; actin-binding LIM protein 1 [KO:K07520]
109562179  ABLIM3; actin-binding LIM protein 3 isoform X1 [KO:K07520]
109560758  ABLIM2; actin-binding LIM protein 2 isoform X1 [KO:K07520]
109560012  NCK1; cytoplasmic protein NCK1 isoform X1 [KO:K07365]
109554525  PAK1; serine/threonine-protein kinase PAK 1 [KO:K04409] [EC:2.7.11.1]
109555415  PAK3; serine/threonine-protein kinase PAK 3 [KO:K05733] [EC:2.7.11.1]
109567943  PAK5; serine/threonine-protein kinase PAK 5 [KO:K05736] [EC:2.7.11.1]
109564925  PAK6; serine/threonine-protein kinase PAK 6 [KO:K05735] [EC:2.7.11.1]
109576171  RHOA; transforming protein RhoA [KO:K04513]
109577829  ROCK1; rho-associated protein kinase 1 isoform X1 [KO:K04514] [EC:2.7.11.1]
109566382  ROCK2; rho-associated protein kinase 2 isoform X1 [KO:K17388] [EC:2.7.11.1]
109553853  UNC5B; netrin receptor UNC5B isoform X1 [KO:K07521]
109560990  UNC5A; netrin receptor UNC5A [KO:K07521]
109553342  UNC5D; netrin receptor UNC5D [KO:K07521]
109559996  UNC5C; netrin receptor UNC5C [KO:K07521]
109570927  PTPN11; tyrosine-protein phosphatase non-receptor type 11 [KO:K07293] [EC:3.1.3.48]
109570168  tyrosine-protein phosphatase non-receptor type 11-like [KO:K07293] [EC:3.1.3.48]
109575525  RGMA; repulsive guidance molecule A [KO:K23096]
109564194  NEO1; neogenin [KO:K06766]
109567416  MYL9; myosin regulatory light polypeptide 9 [KO:K12755]
109577777  myosin regulatory light polypeptide 9 isoform X1 [KO:K12757]
109577779  myosin regulatory light chain 12B [KO:K12757]
109569536  ARHGEF12; rho guanine nucleotide exchange factor 12 isoform X1 [KO:K07532]
109555912  LRIG2; leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X1 [KO:K24609]
109562374  EFNA5; ephrin-A5 isoform X1 [KO:K05462]
109553755  EFNA1; ephrin-A1 [KO:K05462]
109553774  EFNA3; ephrin-A3 isoform X1 [KO:K05462]
109553783  EFNA4; ephrin-A4 isoform X1 [KO:K05462]
109561985  EFNA2; ephrin-A2 [KO:K05462]
109566948  EFNB2; ephrin-B2 [KO:K05463]
109555355  EFNB1; ephrin-B1 [KO:K05463]
109574502  EFNB3; ephrin-B3 [KO:K05463]
109558010  EPHA1; ephrin type-A receptor 1 [KO:K05102] [EC:2.7.10.1]
109574718  EPHA2; ephrin type-A receptor 2 [KO:K05103] [EC:2.7.10.1]
109562619  EPHA3; ephrin type-A receptor 3 isoform X1 [KO:K05104] [EC:2.7.10.1]
109571246  EPHA4; ephrin type-A receptor 4 isoform X1 [KO:K05105] [EC:2.7.10.1]
109563901  EPHA6; ephrin type-A receptor 6 [KO:K05107] [EC:2.7.10.1]
109563900  EPHA7; ephrin type-A receptor 7 isoform X1 [KO:K05108] [EC:2.7.10.1]
109576130  EPHA8; ephrin type-A receptor 8 [KO:K05109] [EC:2.7.10.1]
109563253  EPHB1; ephrin type-B receptor 1 [KO:K05110] [EC:2.7.10.1]
109574025  EPHB2; ephrin type-B receptor 2 isoform X1 [KO:K05111] [EC:2.7.10.1]
109557323  EPHB3; ephrin type-B receptor 3 [KO:K05112] [EC:2.7.10.1]
109578608  EPHB4; ephrin type-B receptor 4 [KO:K05113] [EC:2.7.10.1]
109557741  EPHB6; ephrin type-B receptor 6 [KO:K05114] [EC:2.7.10.1]
109566554  ABL1; tyrosine-protein kinase ABL1 [KO:K06619] [EC:2.7.10.2]
109570451  ENAH; protein enabled homolog isoform X1 [KO:K05746]
109562314  RASA1; ras GTPase-activating protein 1 isoform X1 [KO:K04352]
109556541  NGEF; ephexin-1 isoform X1 [KO:K07525]
109560940  GTPase HRas-like [KO:K02833]
109559581  KRAS; GTPase KRas isoform X1 [KO:K07827]
109555890  NRAS; GTPase NRas [KO:K07828]
109578667  MAPK3; mitogen-activated protein kinase 3 [KO:K04371] [EC:2.7.11.24]
109570973  MAPK1; mitogen-activated protein kinase 1 [KO:K04371] [EC:2.7.11.24]
109566126  NCK2; cytoplasmic protein NCK2 [KO:K19862]
109563375  RGS3; regulator of G-protein signaling 3 isoform X1 [KO:K07524]
109553743  CXCL12; stromal cell-derived factor 1 isoform X1 [KO:K10031]
109568167  CXCR4; C-X-C chemokine receptor type 4 [KO:K04189]
109557337  GNAI1; guanine nucleotide-binding protein G(i) subunit alpha-1 [KO:K04630]
109576257  GNAI2; guanine nucleotide-binding protein G(i) subunit alpha-2 [KO:K04630]
109555970  GNAI3; guanine nucleotide-binding protein G(k) subunit alpha [KO:K04630]
109578986  SLIT1; slit homolog 1 protein [KO:K06838]
109560361  SLIT2; slit homolog 2 protein isoform X1 [KO:K06839]
109574654  SLIT3; LOW QUALITY PROTEIN: slit homolog 3 protein [KO:K06850]
109561454  ROBO1; roundabout homolog 1 isoform X1 [KO:K06753]
109562192  ROBO2; roundabout homolog 2 [KO:K06754]
109554181  ROBO3; roundabout homolog 3 [KO:K06755]
109576345  SRGAP3; SLIT-ROBO Rho GTPase-activating protein 3 isoform X1 [KO:K07526]
109559280  SRGAP1; SLIT-ROBO Rho GTPase-activating protein 1 isoform X1 [KO:K07526]
109570436  SRGAP2; SLIT-ROBO Rho GTPase-activating protein 2 isoform X1 [KO:K07526]
109576287  SEMA3F; semaphorin-3F isoform X1 [KO:K06840]
109576296  SEMA3B; semaphorin-3B isoform X1 [KO:K06840]
109557877  SEMA3A; semaphorin-3A [KO:K06840]
109557326  SEMA3D; semaphorin-3D [KO:K06840]
109557329  SEMA3E; semaphorin-3E [KO:K06840]
109557334  SEMA3C; semaphorin-3C [KO:K06840]
109557640  PLXNA4; plexin-A4 [KO:K06820]
109556950  PLXNA1; plexin-A1 [KO:K06820]
109555407  PLXNA3; LOW QUALITY PROTEIN: plexin-A3 [KO:K06820]
109570440  PLXNA2; LOW QUALITY PROTEIN: plexin-A2 [KO:K06820]
109567922  NRP1; neuropilin-1 isoform X1 [KO:K06724]
109555392  L1CAM; neural cell adhesion molecule L1 isoform X1 [KO:K06550]
109571147  LIMK2; LIM domain kinase 2 isoform X1 [KO:K05744] [EC:2.7.11.1]
109575418  CFL2; cofilin-2 [KO:K05765]
109554636  CFL1; cofilin-1 isoform X1 [KO:K05765]
109554693  RHOD; rho-related GTP-binding protein RhoD [KO:K07530]
109559155  RND1; rho-related GTP-binding protein Rho6 [KO:K07531]
109575630  FES; tyrosine-protein kinase Fes/Fps [KO:K07527] [EC:2.7.10.2]
109566305  DPYSL5; dihydropyrimidinase-related protein 5 [KO:K07529]
109563152  DPYSL2; dihydropyrimidinase-related protein 2 isoform X1 [KO:K07528]
109557798  CDK5; cyclin-dependent-like kinase 5 [KO:K02090] [EC:2.7.11.22]
109553333  SEMA4A; semaphorin-4A isoform X1 [KO:K06521]
109565788  SEMA4C; semaphorin-4C isoform X1 [KO:K06521]
109575569  SEMA4B; semaphorin-4B [KO:K06521]
109565898  SEMA4F; semaphorin-4F isoform X1 [KO:K06521]
109579130  SEMA4G; semaphorin-4G [KO:K06521]
109563285  SEMA4D; semaphorin-4D isoform X1 [KO:K06521]
109574733  SEMA5A; semaphorin-5A [KO:K06841]
109555766  SEMA5B; semaphorin-5B [KO:K06841]
109555180  SEMA6C; semaphorin-6C isoform X1 [KO:K06842]
109561875  SEMA6A; semaphorin-6A isoform X1 [KO:K06842]
109565156  SEMA6D; semaphorin-6D isoform X1 [KO:K06842]
109560962  SEMA6B; semaphorin-6B [KO:K06842]
109576362  PLXNB1; LOW QUALITY PROTEIN: plexin-B1 [KO:K06821]
109554805  PLXNB3; plexin-B3 [KO:K06821]
109557411  MET; LOW QUALITY PROTEIN: hepatocyte growth factor receptor [KO:K05099] [EC:2.7.10.1]
109576053  RAF1; LOW QUALITY PROTEIN: RAF proto-oncogene serine/threonine-protein kinase [KO:K04366] [EC:2.7.11.1]
109572222  RRAS; ras-related protein R-Ras [KO:K07829]
109575596  SEMA7A; semaphorin-7A [KO:K06529]
109558986  PLXNC1; plexin-C1 [KO:K06572]
109567924  ITGB1; integrin beta-1 isoform X1 [KO:K05719]
109563237  PTCH1; protein patched homolog 1 [KO:K06225]
109557614  SMO; smoothened homolog isoform X1 [KO:K06226]
109573366  PRKCA; protein kinase C alpha type [KO:K02677] [EC:2.7.11.13]
109569757  ILK; integrin-linked protein kinase [KO:K06272] [EC:2.7.11.1]
109573858  BOC; brother of CDO isoform X1 [KO:K20020]
109576252  WNT5A; protein Wnt-5a [KO:K00444]
109559776  WNT5B; protein Wnt-5b [KO:K00444]
109575114  LOW QUALITY PROTEIN: frizzled-3-like [KO:K02329]
109562801  FZD3; frizzled-3 [KO:K02329]
109560195  RYK; tyrosine-protein kinase RYK isoform X1 [KO:K05128] [EC:2.7.10.1]
109553698  CAMK2G; calcium/calmodulin-dependent protein kinase type II subunit gamma isoform X1 [KO:K04515] [EC:2.7.11.17]
109560236  CAMK2D; calcium/calmodulin-dependent protein kinase type II subunit delta isoform X1 [KO:K04515] [EC:2.7.11.17]
109557541  CAMK2B; calcium/calmodulin-dependent protein kinase type II subunit beta isoform X1 [KO:K04515] [EC:2.7.11.17]
109562200  CAMK2A; calcium/calmodulin-dependent protein kinase type II subunit alpha [KO:K04515] [EC:2.7.11.17]
109576138  WNT4; protein Wnt-4 [KO:K00408]
109559805  PIK3CB; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922] [EC:2.7.1.153]
109570415  PIK3CD; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform [KO:K00922] [EC:2.7.1.153]
109557823  PIK3CA; LOW QUALITY PROTEIN: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922] [EC:2.7.1.153]
109574805  PIK3R1; LOW QUALITY PROTEIN: phosphatidylinositol 3-kinase regulatory subunit alpha [KO:K02649]
109561418  PIK3R2; phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649]
109556345  phosphatidylinositol 3-kinase regulatory subunit gamma [KO:K02649]
109578066  PDPK1; 3-phosphoinositide-dependent protein kinase 1 [KO:K06276] [EC:2.7.11.1]
109567918  PARD3; partitioning defective 3 homolog [KO:K04237]
109570580  PRKCZ; protein kinase C zeta type [KO:K18952] [EC:2.7.11.13]
109572619  PARD6A; partitioning defective 6 homolog alpha isoform X1 [KO:K06093]
109577957  PARD6G; partitioning defective 6 homolog gamma [KO:K06093]
109554542  SSH3; protein phosphatase Slingshot homolog 3 isoform X1 [KO:K05766] [EC:3.1.3.16 3.1.3.48]
109573630  SSH2; protein phosphatase Slingshot homolog 2 isoform X1 [KO:K05766] [EC:3.1.3.16 3.1.3.48]
109570939  SSH1; protein phosphatase Slingshot homolog 1 [KO:K05766] [EC:3.1.3.16 3.1.3.48]
109567307  BMP7; bone morphogenetic protein 7 [KO:K16621]
109566350  GDF7; growth/differentiation factor 7 [KO:K20013]
109575608  BMPR2; bone morphogenetic protein receptor type-2 [KO:K04671] [EC:2.7.11.30]
109560330  BMPR1B; bone morphogenetic protein receptor type-1B isoform X1 [KO:K13578] [EC:2.7.11.30]
Compound
C00076  Calcium cation
Reference
  Authors
Guan KL, Rao Y.
  Title
Signalling mechanisms mediating neuronal responses to guidance cues.
  Journal
Nat Rev Neurosci 4:941-56 (2003)
DOI:10.1038/nrn1254
Reference
  Authors
Govek EE, Newey SE, Van Aelst L.
  Title
The role of the Rho GTPases in neuronal development.
  Journal
Genes Dev 19:1-49 (2005)
DOI:10.1101/gad.1256405
Reference
  Authors
Huber AB, Kolodkin AL, Ginty DD, Cloutier JF.
  Title
Signaling at the growth cone: ligand-receptor complexes and the control of axon growth and guidance.
  Journal
Annu Rev Neurosci 26:509-63 (2003)
DOI:10.1146/annurev.neuro.26.010302.081139
Reference
  Authors
Negishi M, Oinuma I, Katoh H.
  Title
Plexins: axon guidance and signal transduction.
  Journal
Cell Mol Life Sci 62:1363-71 (2005)
DOI:10.1007/s00018-005-5018-2
Reference
  Authors
Huot J.
  Title
Ephrin signaling in axon guidance.
  Journal
Prog Neuropsychopharmacol Biol Psychiatry 28:813-8 (2004)
DOI:10.1016/j.pnpbp.2004.05.025
Reference
  Authors
Patel BN, Van Vactor DL.
  Title
Axon guidance: the cytoplasmic tail.
  Journal
Curr Opin Cell Biol 14:221-9 (2002)
DOI:10.1016/S0955-0674(02)00308-3
Reference
  Authors
Yu TW, Bargmann CI.
  Title
Dynamic regulation of axon guidance.
  Journal
Nat Neurosci 4 Suppl:1169-76 (2001)
DOI:10.1038/nn748
Reference
  Authors
Dickson BJ.
  Title
Molecular mechanisms of axon guidance.
  Journal
Science 298:1959-64 (2002)
DOI:10.1126/science.1072165
Reference
  Authors
Barallobre MJ, Pascual M, Del Rio JA, Soriano E.
  Title
The Netrin family of guidance factors: emphasis on Netrin-1 signalling.
  Journal
Brain Res Brain Res Rev 49:22-47 (2005)
DOI:10.1016/j.brainresrev.2004.11.003
Reference
  Authors
Sabatier C, Plump AS, Le Ma, Brose K, Tamada A, Murakami F, Lee EY, Tessier-Lavigne M.
  Title
The divergent Robo family protein rig-1/Robo3 is a negative regulator of slit responsiveness required for midline crossing by commissural axons.
  Journal
Cell 117:157-69 (2004)
DOI:10.1016/S0092-8674(04)00303-4
Reference
  Authors
Fujita Y, Yamashita T
  Title
Axon growth inhibition by RhoA/ROCK in the central nervous system.
  Journal
Front Neurosci 8:338 (2014)
DOI:10.3389/fnins.2014.00338
Reference
  Authors
Yamashita T, Mueller BK, Hata K
  Title
Neogenin and repulsive guidance molecule signaling in the central nervous system.
  Journal
Curr Opin Neurobiol 17:29-34 (2007)
DOI:10.1016/j.conb.2006.12.001
Reference
  Authors
van Erp S, van den Heuvel DMA, Fujita Y, Robinson RA, Hellemons AJCGM, Adolfs Y, Van Battum EY, Blokhuis AM, Kuijpers M, Demmers JAA, Hedman H, Hoogenraad CC, Siebold C, Yamashita T, Pasterkamp RJ
  Title
Lrig2 Negatively Regulates Ectodomain Shedding of Axon Guidance Receptors by ADAM Proteases.
  Journal
Dev Cell 35:537-552 (2015)
DOI:10.1016/j.devcel.2015.11.008
Related
pathway
biu04010  MAPK signaling pathway
biu04060  Cytokine-cytokine receptor interaction
biu04310  Wnt signaling pathway
biu04810  Regulation of actin cytoskeleton
KO pathway
ko04360   
LinkDB

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