Entry
Name
Alzheimer disease - Dipodomys spectabilis (banner-tailed kangaroo rat)
Description
Alzheimer disease (AD) is a chronic disorder that slowly destroys neurons and causes serious cognitive disability. AD is associated with senile plaques and neurofibrillary tangles (NFTs). Amyloid-beta (Abeta), a major component of senile plaques, has various pathological effects on cell and organelle function. To date genetic studies have revealed four genes that may be linked to autosomal dominant or familial early onset AD (FAD). These four genes include: amyloid precursor protein (APP), presenilin 1 (PS1), presenilin 2 (PS2) and apolipoprotein E (ApoE). All mutations associated with APP and PS proteins can lead to an increase in the production of Abeta peptides, specfically the more amyloidogenic form, Abeta42. It was proposed that Abeta form Ca2+ permeable pores and bind to and modulate multiple synaptic proteins, including NMDAR, mGluR5 and VGCC, leading to the overfilling of neurons with calcium ions. Consequently, cellular Ca2+ disruptions will lead to neuronal apoptosis, autophagy deficits, mitochondrial abnormality, defective neurotransmission, impaired synaptic plasticity and neurodegeneration in AD. FAD-linked PS1 mutation downregulates the unfolded protein response and leads to vulnerability to ER stress.
Class
Human Diseases; Neurodegenerative disease
BRITE hierarchy
Pathway map
Ortholog table
Organism
Dipodomys spectabilis (banner-tailed kangaroo rat) [GN:
dsp ]
Gene
122117629 Apbb1; amyloid-beta A4 precursor protein-binding family B member 1 [KO:K04529 ]
122114211 Ndufv3; NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial [KO:K03944 ]
122128220 Ndufa1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [KO:K03945 ]
122108040 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like [KO:K03945 ]
122118108 Ndufa2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [KO:K03946 ]
122110711 Ndufa3; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 [KO:K03947 ]
122124167 Ndufa4l2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2 [KO:K03948 ]
122121866 Ndufa5; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 [KO:K03949 ]
122123541 Ndufa6; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [KO:K03950 ]
122119662 Ndufa7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 [KO:K03951 ]
122107085 Ndufa8; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 [KO:K03952 ]
122102116 Ndufa9; LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [KO:K03953 ]
122115668 Ndufa10; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [KO:K03954 ]
122122737 Ndufa11; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 [KO:K03956 ]
122119277 Ndufa12; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [KO:K11352 ]
122100836 Ndufa13; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 [KO:K11353 ]
122118714 Ndufb1; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 [KO:K03957 ]
122105938 Ndufb2; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial [KO:K03958 ]
122096426 Ndufb3; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 [KO:K03959 ]
122126228 LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like [KO:K03959 ]
122098774 Ndufb4; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 [KO:K03960 ]
122099228 Ndufb5; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial [KO:K03961 ]
122120998 Ndufb6; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 [KO:K03962 ]
122119574 Ndufb7; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [KO:K03963 ]
122115954 Ndufb8; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [KO:K03964 ]
122102448 Ndufb9; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [KO:K03965 ]
122123702 Ndufb10; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [KO:K03966 ]
122111716 Ndufb11; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial [KO:K11351 ]
122109574 Ndufs2; NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial [KO:K03935 ] [EC:7.1.1.2 ]
122104850 Ndufs3; NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial [KO:K03936 ] [EC:7.1.1.2 ]
122117000 Ndufs4; NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [KO:K03937 ]
122107146 Ndufs5; NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 [KO:K03938 ]
122120953 Ndufs6; NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [KO:K03939 ]
122122878 Ndufs7; NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [KO:K03940 ] [EC:7.1.1.2 ]
122105323 Ndufs8; NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial [KO:K03941 ] [EC:7.1.1.2 ]
122127166 Ndufc1; NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial [KO:K03967 ]
122120947 Sdha; succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234 ] [EC:1.3.5.1 ]
122099154 Sdhb; succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [KO:K00235 ] [EC:1.3.5.1 ]
122109696 Sdhc; succinate dehydrogenase cytochrome b560 subunit, mitochondrial [KO:K00236 ]
122124981 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial-like [KO:K00237 ]
122110255 Sdhd; succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [KO:K00237 ]
122107694 cytochrome b-c1 complex subunit 6, mitochondrial-like [KO:K00416 ]
122120460 cytochrome c oxidase subunit 4 isoform 2, mitochondrial [KO:K02263 ]
122101094 cytochrome c oxidase subunit 4 isoform 1, mitochondrial [KO:K02263 ]
122104575 cytochrome c oxidase subunit 7A-related protein, mitochondrial [KO:K02270 ]
122113006 Atp5f1c; ATP synthase subunit gamma, mitochondrial isoform X1 [KO:K02136 ]
122104432 ATP synthase F(0) complex subunit B1, mitochondrial-like [KO:K02127 ]
122105773 Atp5pb; ATP synthase F(0) complex subunit B1, mitochondrial [KO:K02127 ]
122103388 Atp5mc1; ATP synthase F(0) complex subunit C1, mitochondrial isoform X1 [KO:K02128 ]
122120084 Atp5mc3; ATP synthase F(0) complex subunit C3, mitochondrial [KO:K02128 ]
122124362 Atp5mc2; ATP synthase F(0) complex subunit C2, mitochondrial [KO:K02128 ]
122105474 Atp5pf; ATP synthase-coupling factor 6, mitochondrial [KO:K02131 ]
122115367 Vdac1; voltage-dependent anion-selective channel protein 1 [KO:K05862 ]
122116516 Vdac2; voltage-dependent anion-selective channel protein 2 [KO:K15040 ]
122107662 Vdac3; voltage-dependent anion-selective channel protein 3 [KO:K15041 ]
122101658 voltage-dependent anion-selective channel protein 3-like [KO:K15041 ]
122124406 Lrp1; prolow-density lipoprotein receptor-related protein 1 [KO:K04550 ]
122116005 Fas; tumor necrosis factor receptor superfamily member 6 [KO:K04390 ]
122102541 Tnfrsf1a; tumor necrosis factor receptor superfamily member 1A [KO:K03158 ]
122127053 Ppp3ca; serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform [KO:K04348 ] [EC:3.1.3.16 ]
122096621 Ppp3cc; serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
122116547 Ppp3cb; serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1 [KO:K04348 ] [EC:3.1.3.16 ]
122105036 Bad; bcl2-associated agonist of cell death isoform X1 [KO:K02158 ]
122095118 Gnaq; guanine nucleotide-binding protein G(q) subunit alpha [KO:K04634 ]
122120299 Plcb1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
122114401 Plcb2; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 isoform X1 [KO:K05858 ] [EC:3.1.4.11 ]
122102555 Grin1; glutamate receptor ionotropic, NMDA 1 isoform X1 [KO:K05208 ]
122094969 Grin2c; glutamate receptor ionotropic, NMDA 2C isoform X1 [KO:K05211 ]
122108123 Cacna1d; voltage-dependent L-type calcium channel subunit alpha-1D [KO:K04851 ]
122098776 Cacna1f; voltage-dependent L-type calcium channel subunit alpha-1F isoform X1 [KO:K04853 ]
122126705 Cacna1s; voltage-dependent L-type calcium channel subunit alpha-1S [KO:K04857 ]
122122998 Chrna7; neuronal acetylcholine receptor subunit alpha-7 [KO:K04809 ]
122108136 Itpr1; inositol 1,4,5-trisphosphate receptor type 1 isoform X1 [KO:K04958 ]
122111510 Itpr3; inositol 1,4,5-trisphosphate receptor type 3 isoform X1 [KO:K04960 ]
122109183 Atf6; cyclic AMP-dependent transcription factor ATF-6 alpha [KO:K09054 ]
122117971 Eif2s1; eukaryotic translation initiation factor 2 subunit 1 [KO:K03237 ]
122123666 Atf4; cyclic AMP-dependent transcription factor ATF-4 [KO:K04374 ]
122097063 Psmd2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028 ]
122107359 Psmd1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032 ]
122103275 Psmd3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033 ]
122098523 Psmd9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693 ]
122094924 Psmd12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035 ]
122118095 Psmd11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036 ]
122108147 Psmd6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037 ]
122126198 Psmd7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038 ]
122095018 Psmd13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039 ]
122109213 Psmd4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029 ]
122110797 Psmd14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030 ]
122097575 Psmd8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031 ]
122098342 Slc11a2; natural resistance-associated macrophage protein 2 isoform X1 [KO:K21398 ]
122104921 Lrp5; low-density lipoprotein receptor-related protein 5 [KO:K03068 ]
122101230 Lrp6; low-density lipoprotein receptor-related protein 6 [KO:K03068 ]
122127322 Dvl1; segment polarity protein dishevelled homolog DVL-1 isoform X1 [KO:K02353 ]
122096769 Dvl3; segment polarity protein dishevelled homolog DVL-3 [KO:K02353 ]
122100418 Dvl2; segment polarity protein dishevelled homolog DVL-2 isoform X1 [KO:K02353 ]
122122822 Apc2; LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2 [KO:K02085 ]
122111560 Ager; advanced glycosylation end product-specific receptor [KO:K19722 ]
122127164 Nfkb1; nuclear factor NF-kappa-B p105 subunit isoform X1 [KO:K02580 ]
122109178 Csf1; macrophage colony-stimulating factor 1 isoform X1 [KO:K05453 ]
122104582 Eif2ak2; interferon-induced, double-stranded RNA-activated protein kinase isoform X1 [KO:K16195 ] [EC:2.7.11.1 ]
122108047 phosphatidylinositol 3-kinase regulatory subunit gamma [KO:K02649 ]
122100872 Pik3r2; LOW QUALITY PROTEIN: phosphatidylinositol 3-kinase regulatory subunit beta [KO:K02649 ]
122117343 Pik3r1; phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1 [KO:K02649 ]
122095294 Pik3cb; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform [KO:K00922 ] [EC:2.7.1.153 ]
122121501 Pik3cd; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform isoform X1 [KO:K00922 ] [EC:2.7.1.153 ]
122107232 Pik3ca; phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform [KO:K00922 ] [EC:2.7.1.153 ]
122123339 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform-like [KO:K00922 ] [EC:2.7.1.153 ]
122121924 Rb1cc1; RB1-inducible coiled-coil protein 1 isoform X1 [KO:K17589 ]
122104920 Ambra1; activating molecule in BECN1-regulated autophagy protein 1 isoform X1 [KO:K17985 ]
122110021 Atg14; beclin 1-associated autophagy-related key regulator [KO:K17889 ]
122118652 Atg2b; autophagy-related protein 2 homolog B isoform X1 [KO:K17906 ]
122104662 Atg2a; autophagy-related protein 2 homolog A isoform X1 [KO:K17906 ]
122094925 Wipi1; WD repeat domain phosphoinositide-interacting protein 1 isoform X1 [KO:K17908 ]
122113746 Wipi2; WD repeat domain phosphoinositide-interacting protein 2 isoform X1 [KO:K17908 ]
Compound
C01245 D-myo-Inositol 1,4,5-trisphosphate
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C16514 Amyloid beta protein 40
C16515 Amyloid beta protein 42
C21011 [Protein]-N(epsilon)-(carboxymethyl)lysine
C21012 [Protein]-N(epsilon)-(carboxyethyl)lysine
Reference
Authors
Dickson DW
Title
Apoptotic mechanisms in Alzheimer neurofibrillary degeneration: cause or effect?
Journal
Reference
Authors
Takuma K, Yan SS, Stern DM, Yamada K
Title
Mitochondrial dysfunction, endoplasmic reticulum stress, and apoptosis in Alzheimer's disease.
Journal
Reference
Authors
Bezprozvanny I, Mattson MP
Title
Neuronal calcium mishandling and the pathogenesis of Alzheimer's disease.
Journal
Reference
Authors
Holscher C
Title
Possible causes of Alzheimer's disease: amyloid fragments, free radicals, and calcium homeostasis.
Journal
Reference
Authors
Bojarski L, Herms J, Kuznicki J
Title
Calcium dysregulation in Alzheimer's disease.
Journal
Reference
Authors
Kondratskyi A, Kondratska K, Skryma R, Prevarskaya N
Title
Ion channels in the regulation of apoptosis.
Journal
Reference
Authors
Popugaeva E, Pchitskaya E, Bezprozvanny I
Title
Dysregulation of Intracellular Calcium Signaling in Alzheimer's Disease.
Journal
Reference
Authors
Tan Y, Deng Y, Qing H
Title
Calcium channel blockers and Alzheimer's disease.
Journal
Reference
Authors
Small DH, Mok SS, Bornstein JC
Title
Alzheimer's disease and Abeta toxicity: from top to bottom.
Journal
Reference
Authors
Parihar MS, Hemnani T
Title
Alzheimer's disease pathogenesis and therapeutic interventions.
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Reference
Authors
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Title
Presenilin-mediated signal transduction.
Journal
Reference
Authors
Honarnejad K, Herms J
Title
Presenilins: role in calcium homeostasis.
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Reference
Authors
Supnet C, Bezprozvanny I
Title
Presenilins function in ER calcium leak and Alzheimer's disease pathogenesis.
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Reference
Authors
Hauptmann S, Keil U, Scherping I, Bonert A, Eckert A, Muller WE
Title
Mitochondrial dysfunction in sporadic and genetic Alzheimer's disease.
Journal
Reference
Authors
Chen Y, Liu W, McPhie DL, Hassinger L, Neve RL
Title
APP-BP1 mediates APP-induced apoptosis and DNA synthesis and is increased in Alzheimer's disease brain.
Journal
Reference
Authors
Eckert A, Nisbet R, Grimm A, Gotz J
Title
March separate, strike together--role of phosphorylated TAU in mitochondrial dysfunction in Alzheimer's disease.
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Reference
Authors
Strickland MR, Holtzman DM
Title
Dr. Jekyll and Mr. Hyde: ApoE explains opposing effects of neuronal LRP1.
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Reference
Authors
Ivins KJ, Thornton PL, Rohn TT, Cotman CW
Title
Neuronal apoptosis induced by beta-amyloid is mediated by caspase-8.
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Reference
Authors
Sushma, Mondal AC
Title
Role of GPCR signaling and calcium dysregulation in Alzheimer's disease.
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Reference
Authors
Sanz-Blasco S, Valero RA, Rodriguez-Crespo I, Villalobos C, Nunez L
Title
Mitochondrial Ca2+ overload underlies Abeta oligomers neurotoxicity providing an unexpected mechanism of neuroprotection by NSAIDs.
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Reference
Authors
Mattson MP
Title
ER calcium and Alzheimer's disease: in a state of flux.
Journal
Reference
Authors
Lee SY, Hwang DY, Kim YK, Lee JW, Shin IC, Oh KW, Lee MK, Lim JS, Yoon DY, Hwang SJ, Hong JT
Title
PS2 mutation increases neuronal cell vulnerability to neurotoxicants through activation of caspase-3 by enhancing of ryanodine receptor-mediated calcium release.
Journal
Reference
Authors
Katayama T, Imaizumi K, Honda A, Yoneda T, Kudo T, Takeda M, Mori K, Rozmahel R, Fraser P, George-Hyslop PS, Tohyama M
Title
Disturbed activation of endoplasmic reticulum stress transducers by familial Alzheimer's disease-linked presenilin-1 mutations.
Journal
Reference
Authors
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Title
ApoE, ApoE Receptors, and the Synapse in Alzheimer's Disease.
Journal
Reference
Authors
Wasser CR, Herz J
Title
Reelin: Neurodevelopmental Architect and Homeostatic Regulator of Excitatory Synapses.
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Reference
Authors
Lilja AM, Porras O, Storelli E, Nordberg A, Marutle A
Title
Functional interactions of fibrillar and oligomeric amyloid-beta with alpha7 nicotinic receptors in Alzheimer's disease.
Journal
Reference
Authors
Anastasio TJ
Title
Computational identification of potential multitarget treatments for ameliorating the adverse effects of amyloid-beta on synaptic plasticity.
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Reference
Authors
Vargas LM, Cerpa W, Munoz FJ, Zanlungo S, Alvarez AR
Title
Amyloid-beta oligomers synaptotoxicity: The emerging role of EphA4/c-Abl signaling in Alzheimer's disease.
Journal
Reference
Authors
Tu S, Okamoto S, Lipton SA, Xu H
Title
Oligomeric Abeta-induced synaptic dysfunction in Alzheimer's disease.
Journal
Reference
Authors
Palomer E, Buechler J, Salinas PC
Title
Wnt Signaling Deregulation in the Aging and Alzheimer's Brain.
Journal
Reference
Authors
Vallee A, Lecarpentier Y
Title
Alzheimer Disease: Crosstalk between the Canonical Wnt/Beta-Catenin Pathway and PPARs Alpha and Gamma.
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Reference
Authors
Origlia N, Arancio O, Domenici L, Yan SS
Title
MAPK, beta-amyloid and synaptic dysfunction: the role of RAGE.
Journal
Reference
Authors
Srikanth V, Maczurek A, Phan T, Steele M, Westcott B, Juskiw D, Munch G
Title
Advanced glycation endproducts and their receptor RAGE in Alzheimer's disease.
Journal
Reference
Authors
Pigino G, Morfini G, Pelsman A, Mattson MP, Brady ST, Busciglio J
Title
Alzheimer's presenilin 1 mutations impair kinesin-based axonal transport.
Journal
Reference
Authors
Roy S, Zhang B, Lee VM, Trojanowski JQ
Title
Axonal transport defects: a common theme in neurodegenerative diseases.
Journal
Reference
Authors
Ferreira ST, Lourenco MV, Oliveira MM, De Felice FG
Title
Soluble amyloid-beta oligomers as synaptotoxins leading to cognitive impairment in Alzheimer's disease.
Journal
Reference
Authors
De Felice FG, Lourenco MV, Ferreira ST
Title
How does brain insulin resistance develop in Alzheimer's disease?
Journal
Reference
Authors
Bedse G, Di Domenico F, Serviddio G, Cassano T
Title
Aberrant insulin signaling in Alzheimer's disease: current knowledge.
Journal
Reference
Authors
Funderburk SF, Marcellino BK, Yue Z
Title
Cell "self-eating" (autophagy) mechanism in Alzheimer's disease.
Journal
Related pathway
dsp04141 Protein processing in endoplasmic reticulum
dsp04933 AGE-RAGE signaling pathway in diabetic complications
KO pathway
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