GFIT result for
ssub
|
GFIT result for
ssub
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ssub:CP968_06615 (352 a.a.) |
-- |
ATP-dependent DNA ligase | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > sxt:KPP03845_106085(351) | 339 | 94.1 | 2254 | 1 | -> | ligD_2; Multifunctional non-homologous end joining protein LigD | |||
| > snf:JYK04_06827(339) | 339 | 94.1 | 2244 | 3 | -> | ligD_2; Multifunctional non-homologous end joining protein LigD | |||
| > sgk:PET44_26435(?) | 339 | 93.2 | 2239 | 0 | -- | - | |||
| > slx:SLAV_07660(339) | 339 | 93.5 | 2235 | 2 | -> | ykoU1; putative ATP-dependent DNA ligase YkoU | |||
| > syan:NRK68_28455(339) | 336 | 94.3 | 2228 | 1 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > svn:CP980_06115(352) | 340 | 90.6 | 2200 | 1 | -> | ATP-dependent DNA ligase | |||
| > strm:M444_27905(332) | 332 | 92.8 | 2191 | 3 | -> | ATP-dependent DNA ligase | |||
| > sgz:C0216_10495(350) | 348 | 89.1 | 2175 | 4 | <> | ATP-dependent DNA ligase | |||
| > shun:DWB77_01452(338) | 335 | 86.3 | 2030 | 4 | -> | ligD_1; Multifunctional non-homologous end joining protein LigD | |||
| > sdx:C4B68_05115(337) | 336 | 83.3 | 2013 | 4 | -- | ATP-dependent DNA ligase | |||
| > spad:DVK44_30635(332) | 331 | 85.2 | 2010 | 8 | -> | ATP-dependent DNA ligase | |||
| > sfb:CP974_26715(335) | 334 | 84.7 | 2001 | 5 | -> | ATP-dependent DNA ligase | |||
| > saqu:EJC51_39165(339) | 337 | 82.8 | 1992 | 4 | -> | ATP-dependent DNA ligase | |||
| > sgd:ELQ87_05555(338) | 337 | 82.8 | 1988 | 2 | -> | ATP-dependent DNA ligase | |||
| > sma:SAVERM_1696(338) | 336 | 83.0 | 1987 | 1 | -> | putative DNA primase, small subunit | |||
| > sls:SLINC_7141(347) | 347 | 80.4 | 1986 | 4 | -> | hypothetical protein | |||
| > srn:A4G23_04998(331) | 331 | 84.9 | 1986 | 5 | -> | ykoU; putative ATP-dependent DNA ligase YkoU | |||
| > sfy:GFH48_08370(340) | 333 | 83.8 | 1985 | 2 | -> | ATP-dependent DNA ligase | |||
| > slk:SLUN_33850(336) | 336 | 82.7 | 1985 | 2 | -> | ATP-dependent DNA ligase | |||
| > speu:CGZ69_31465(337) | 332 | 83.4 | 1983 | 4 | -> | ATP-dependent DNA ligase | |||
| > sroi:IAG44_06405(337) | 336 | 82.1 | 1981 | 10 | -> | DNA polymerase domain-containing protein | |||
| > sgal:CP966_30780(343) | 341 | 81.8 | 1978 | 3 | -> | ATP-dependent DNA ligase | |||
| > sphw:NFX46_12395(343) | 335 | 83.6 | 1978 | 5 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > sgx:H4W23_32420(347) | 352 | 79.5 | 1976 | 4 | -> | DNA polymerase domain-containing protein | |||
| > scyn:N8I84_34035(?) | 349 | 79.7 | 1971 | 0 | -- | - | |||
| > scoa:QU709_04965(?) | 333 | 82.9 | 1968 | 0 | -- | - | |||
| > scw:TU94_28790(341) | 333 | 83.5 | 1968 | 4 | -> | ATP-dependent DNA ligase | |||
| > scx:AS200_09235(338) | 337 | 82.2 | 1965 | 3 | -> | ATP-dependent DNA ligase | |||
| > slau:SLA_6344(331) | 331 | 83.1 | 1965 | 4 | <> | ATP-dependent DNA ligase | |||
| > staa:LDH80_08040(342) | 338 | 81.4 | 1963 | 4 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > kbu:Q4V64_46800(?) | 350 | 78.9 | 1962 | 0 | -- | - | |||
| > sle:sle_11170(341) | 333 | 83.2 | 1960 | 4 | -> | sle_11170; Probable ATP-dependent DNA ligase ykoU | |||
| > slia:HA039_04550(334) | 332 | 82.5 | 1959 | 5 | -> | DNA polymerase domain-containing protein | |||
| > snz:DC008_29420(349) | 345 | 79.4 | 1958 | 8 | -> | ATP-dependent DNA ligase | |||
| > sge:DWG14_01464(341) | 337 | 81.0 | 1957 | 4 | -> | ligD_1; Multifunctional non-homologous end joining protein LigD | |||
| > sroc:RGF97_03870(?) | 338 | 81.4 | 1957 | 0 | -- | - | |||
| > slf:JEQ17_09005(342) | 336 | 81.5 | 1956 | 4 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > sfi:SFUL_6474(345) | 339 | 80.8 | 1955 | 3 | -> | putative eukaryotic-type DNA primase | |||
| > sve:SVEN_6395(343) | 338 | 81.4 | 1955 | 4 | -> | ATP-dependent DNA ligase | |||
| > sclf:BB341_03015(338) | 333 | 82.3 | 1954 | 2 | -> | ATP-dependent DNA ligase | |||
| > sfiy:F0344_02935(?) | 337 | 81.6 | 1954 | 0 | -- | - | |||
| > scir:STRCI_006817(338) | 337 | 81.3 | 1953 | 2 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > scya:EJ357_40240(341) | 340 | 80.9 | 1952 | 3 | -> | ATP-dependent DNA ligase | |||
| > sdv:BN159_1715(338) | 333 | 82.6 | 1951 | 3 | -> | DNA polymerase LigD, polymerase domain-containing protein | |||
| > sspb:CP982_33870(340) | 339 | 80.5 | 1951 | 4 | -> | ATP-dependent DNA ligase | |||
| > sfeu:IM697_28735(355) | 351 | 78.3 | 1948 | 8 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > strf:ASR50_30230(337) | 332 | 81.6 | 1948 | 2 | -> | ATP-dependent DNA ligase | |||
| > sanl:KZO11_32570(?) | 344 | 79.9 | 1947 | 0 | -- | - | |||
| > sfic:EIZ62_04680(332) | 332 | 82.8 | 1946 | 2 | -> | ATP-dependent DNA ligase | |||
| > scav:CVT27_29755(339) | 332 | 82.2 | 1944 | 5 | -> | ATP-dependent DNA ligase | |||
| > scz:ABE83_03945(339) | 332 | 82.2 | 1944 | 6 | -> | ATP-dependent DNA ligase | |||
| > stry:EQG64_31085(339) | 332 | 82.2 | 1944 | 1 | -> | ATP-dependent DNA ligase | |||
| > slai:P8A22_04430(?) | 331 | 82.2 | 1942 | 0 | -- | - | |||
| > stsu:B7R87_29220(345) | 333 | 81.4 | 1942 | 3 | -> | ATP-dependent DNA ligase | |||
| > kab:B7C62_32400(340) | 336 | 81.2 | 1941 | 5 | -> | ATP-dependent DNA ligase | |||
| > sata:C5746_35570(336) | 332 | 82.5 | 1941 | 4 | -> | ATP-dependent DNA ligase | |||
| > sfp:QUY26_06030(?) | 339 | 80.8 | 1939 | 0 | -- | - | |||
| > snw:BBN63_04690(343) | 346 | 80.1 | 1938 | 3 | -> | ATP-dependent DNA ligase | |||
| > scad:DN051_08745(341) | 333 | 82.6 | 1936 | 3 | -> | ATP-dependent DNA ligase | |||
| > sgr:SGR_1023(345) | 336 | 81.0 | 1936 | 1 | -> | conserved hypothetical protein | |||
| > schf:IPT68_31440(341) | 333 | 82.0 | 1935 | 3 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > scoe:CP976_36845(343) | 341 | 78.9 | 1935 | 5 | -> | ATP-dependent DNA ligase | |||
| > sqz:FQU76_29090(351) | 333 | 81.1 | 1935 | 4 | -> | DNA polymerase domain-containing protein | |||
| > scye:R2B67_03615(?) | 335 | 80.6 | 1934 | 0 | -- | - | |||
| > sact:DMT42_32200(343) | 333 | 81.7 | 1933 | 3 | -> | ATP-dependent DNA ligase | |||
| > stir:DDW44_26985(373) | 335 | 80.9 | 1933 | 38 | -> | ATP-dependent DNA ligase | |||
| > snq:CP978_28755(342) | 335 | 80.9 | 1931 | 2 | -> | ATP-dependent DNA ligase | |||
| > sals:SLNWT_0413(340) | 339 | 80.5 | 1930 | 5 | -> | DNA polymerase LigD, polymerase domain-containing protein | |||
| > sgb:WQO_30490(336) | 335 | 80.9 | 1929 | 1 | -> | ATP-dependent DNA ligase | |||
| > scha:CP983_06760(353) | 349 | 77.9 | 1928 | 9 | -> | ATP-dependent DNA ligase | |||
| > sgrf:SGFS_027240(?) | 332 | 81.6 | 1928 | 0 | -- | - | |||
| > saov:G3H79_04910(339) | 339 | 79.6 | 1925 | 4 | -> | DNA polymerase domain-containing protein | |||
| > ssx:SACTE_5877(337) | 332 | 81.6 | 1925 | 2 | -> | DNA polymerase LigD, polymerase domain protein | |||
| > ska:CP970_04815(343) | 343 | 81.3 | 1924 | 8 | -> | ATP-dependent DNA ligase | |||
| > sgm:GCM10017557_11980(342) | 334 | 82.0 | 1922 | 3 | -> | ATP-dependent DNA ligase | |||
| > sfa:Sfla_0696(336) | 335 | 80.0 | 1921 | 4 | -> | DNA polymerase LigD, polymerase domain protein | |||
| > strp:F750_6168(336) | 335 | 80.0 | 1921 | 4 | -> | ATP-dependent DNA ligase | |||
| > sfk:KY5_7049(343) | 343 | 81.0 | 1920 | 6 | -> | ATP-dependent DNA ligase | |||
| > sphv:F9278_40495(336) | 333 | 81.4 | 1918 | 2 | -> | DNA polymerase domain-containing protein | |||
| > sspo:DDQ41_28285(364) | 332 | 79.8 | 1918 | 6 | -> | ATP-dependent DNA ligase | |||
| > svu:B1H20_31320(346) | 336 | 80.7 | 1918 | 6 | -> | ATP-dependent DNA ligase | |||
| > snk:CP967_02530(341) | 332 | 81.3 | 1917 | 2 | -- | ATP-dependent DNA ligase | |||
| > scal:I6J39_31125(346) | 336 | 80.7 | 1916 | 3 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > sspn:LXH13_33040(350) | 343 | 79.0 | 1914 | 4 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > sjn:RI060_06030(?) | 343 | 78.1 | 1913 | 0 | -- | - | |||
| > slon:LGI35_35225(341) | 341 | 79.8 | 1913 | 3 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > scyg:S1361_33070(337) | 333 | 80.8 | 1912 | 6 | -> | ykoU; putative ATP-dependent DNA ligase YkoU | |||
| > sdd:D9753_05320(335) | 334 | 80.2 | 1912 | 2 | -> | ATP-dependent DNA ligase | |||
| > sgob:test1122_01580(337) | 334 | 79.3 | 1912 | 3 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > spri:SPRI_1067(337) | 332 | 81.3 | 1911 | 2 | -> | DNA polymerase LigD polymerase subunit | |||
| > strt:A8713_27130(343) | 339 | 79.4 | 1911 | 3 | -> | ATP-dependent DNA ligase | |||
| > sauo:BV401_38205(334) | 332 | 80.4 | 1910 | 5 | -> | ATP-dependent DNA ligase | |||
| > sbro:GQF42_37395(335) | 334 | 79.6 | 1910 | 5 | -> | ATP-dependent DNA ligase | |||
| > sgf:HEP81_01215(339) | 333 | 81.1 | 1910 | 3 | -> | ATP-dependent DNA ligase | |||
| > smal:SMALA_6914(334) | 332 | 80.4 | 1910 | 6 | -> | DNA primase small subunit | |||
| > srj:SRO_1248(339) | 333 | 81.1 | 1910 | 2 | -> | hypothetical protein | |||
| > ssoi:I1A49_38350(334) | 332 | 80.4 | 1910 | 6 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > smob:J7W19_03000(347) | 329 | 82.1 | 1909 | 5 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > sast:CD934_03525(340) | 332 | 79.2 | 1907 | 3 | -> | ATP-dependent DNA ligase | |||
| > scb:SCAB_13581(336) | 333 | 80.8 | 1907 | 4 | -> | conserved hypothetical protein | |||