GFIT result for
slf
|
GFIT result for
slf
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| slf:JEQ17_09005 (342 a.a.) |
-- |
ligD; non-homologous end-joining DNA ligase | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > sgm:GCM10017557_11980(342) | 339 | 93.5 | 2221 | 3 | <> | ATP-dependent DNA ligase | |||
| > sfy:GFH48_08370(340) | 338 | 92.0 | 2186 | 2 | -> | ATP-dependent DNA ligase | |||
| > sdx:C4B68_05115(337) | 336 | 92.6 | 2174 | 4 | <- | ATP-dependent DNA ligase | |||
| > sma:SAVERM_1696(338) | 338 | 90.8 | 2161 | 1 | -> | putative DNA primase, small subunit | |||
| > sphv:F9278_40495(336) | 335 | 92.5 | 2153 | 2 | <> | DNA polymerase domain-containing protein | |||
| > sgrf:SGFS_027240(?) | 335 | 91.6 | 2151 | 0 | -- | - | |||
| > sakb:K1J60_05585(336) | 335 | 91.3 | 2146 | 4 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > scae:IHE65_05975(336) | 335 | 91.3 | 2145 | 3 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > sdec:L3078_38750(336) | 335 | 91.3 | 2141 | 2 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > schf:IPT68_31440(341) | 342 | 89.2 | 2135 | 3 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > skg:KJK29_04455(?) | 342 | 88.0 | 2132 | 0 | -- | - | |||
| > scoe:CP976_36845(343) | 343 | 88.0 | 2129 | 5 | <> | ATP-dependent DNA ligase | |||
| > scb:SCAB_13581(336) | 335 | 90.7 | 2127 | 4 | -> | conserved hypothetical protein | |||
| > sjn:RI060_06030(?) | 342 | 87.7 | 2127 | 0 | -- | - | |||
| > scad:DN051_08745(341) | 342 | 88.9 | 2125 | 3 | <> | ATP-dependent DNA ligase | |||
| > scoa:QU709_04965(?) | 342 | 88.3 | 2123 | 0 | -- | - | |||
| > sgd:ELQ87_05555(338) | 337 | 89.3 | 2123 | 2 | <> | ATP-dependent DNA ligase | |||
| > scyn:N8I84_34035(?) | 342 | 88.3 | 2122 | 0 | -- | - | |||
| > sge:DWG14_01464(341) | 342 | 88.6 | 2121 | 4 | <> | ligD_1; Multifunctional non-homologous end joining protein LigD | |||
| > scir:STRCI_006817(338) | 336 | 90.2 | 2120 | 2 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > sdv:BN159_1715(338) | 336 | 89.9 | 2117 | 3 | <> | DNA polymerase LigD, polymerase domain-containing protein | |||
| > shaw:CEB94_35325(343) | 343 | 87.8 | 2116 | 2 | <> | ATP-dependent DNA ligase | |||
| > sci:B446_30625(347) | 336 | 89.0 | 2111 | 4 | -> | hypothetical protein | |||
| > stui:GCM10017668_60650(343) | 343 | 87.2 | 2109 | 2 | <- | ATP-dependent DNA ligase | |||
| > sls:SLINC_7141(347) | 344 | 87.5 | 2108 | 4 | <> | hypothetical protein | |||
| > snq:CP978_28755(342) | 341 | 87.4 | 2106 | 2 | -> | ATP-dependent DNA ligase | |||
| > stsi:A4E84_34485(343) | 343 | 87.2 | 2105 | 3 | <> | ATP-dependent DNA ligase | |||
| > saqu:EJC51_39165(339) | 336 | 89.0 | 2098 | 4 | <> | ATP-dependent DNA ligase | |||
| > sact:DMT42_32200(343) | 335 | 89.0 | 2097 | 3 | -> | ATP-dependent DNA ligase | |||
| > scya:EJ357_40240(341) | 336 | 88.7 | 2096 | 3 | -> | ATP-dependent DNA ligase | |||
| > scx:AS200_09235(338) | 336 | 88.1 | 2095 | 3 | -> | ATP-dependent DNA ligase | |||
| > sphw:NFX46_12395(343) | 341 | 87.7 | 2094 | 5 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > sspn:LXH13_33040(350) | 343 | 87.8 | 2092 | 4 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > sgal:CP966_30780(343) | 343 | 87.5 | 2090 | 3 | <> | ATP-dependent DNA ligase | |||
| > kbu:Q4V64_46800(?) | 342 | 86.8 | 2086 | 0 | -- | - | |||
| > sgu:SGLAU_28045(336) | 335 | 88.4 | 2086 | 2 | <> | hypothetical protein | |||
| > scw:TU94_28790(341) | 335 | 88.7 | 2081 | 4 | <> | ATP-dependent DNA ligase | |||
| > sle:sle_11170(341) | 339 | 87.9 | 2079 | 4 | <> | sle_11170; Probable ATP-dependent DNA ligase ykoU | |||
| > sast:CD934_03525(340) | 341 | 86.8 | 2073 | 3 | <> | ATP-dependent DNA ligase | |||
| > sfeu:IM697_28735(355) | 338 | 86.4 | 2068 | 8 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > sroi:IAG44_06405(337) | 334 | 87.1 | 2065 | 10 | <> | DNA polymerase domain-containing protein | |||
| > snz:DC008_29420(349) | 346 | 85.0 | 2063 | 8 | <> | ATP-dependent DNA ligase | |||
| > scha:CP983_06760(353) | 339 | 86.1 | 2057 | 9 | <> | ATP-dependent DNA ligase | |||
| > sgf:HEP81_01215(339) | 339 | 86.7 | 2057 | 3 | -> | ATP-dependent DNA ligase | |||
| > srj:SRO_1248(339) | 339 | 86.7 | 2057 | 2 | -> | hypothetical protein | |||
| > scyg:S1361_33070(337) | 335 | 86.9 | 2053 | 6 | -> | ykoU; putative ATP-dependent DNA ligase YkoU | |||
| > sbro:GQF42_37395(335) | 332 | 86.1 | 2037 | 5 | -> | ATP-dependent DNA ligase | |||
| > spun:BFF78_06685(335) | 333 | 86.8 | 2035 | 3 | -> | ATP-dependent DNA ligase | |||
| > sgs:AVL59_14860(335) | 332 | 86.4 | 2034 | 1 | -> | ATP-dependent DNA ligase | |||
| > strt:A8713_27130(343) | 342 | 83.9 | 2032 | 3 | -> | ATP-dependent DNA ligase | |||
| > sinn:ABB07_05170(?) | 332 | 87.3 | 2028 | 0 | -- | - | |||
| > srw:TUE45_07257(331) | 326 | 88.3 | 2027 | 6 | -> | ykoU; putative ATP-dependent DNA ligase YkoU | |||
| > strf:ASR50_30230(337) | 335 | 85.7 | 2026 | 2 | <> | ATP-dependent DNA ligase | |||
| > sdd:D9753_05320(335) | 337 | 85.8 | 2023 | 2 | -> | ATP-dependent DNA ligase | |||
| > sco:SCO6709(341) | 340 | 84.1 | 2019 | 2 | <- | SC4C6.19; hypothetical protein | |||
| > slv:SLIV_04965(341) | 340 | 83.8 | 2019 | 2 | <> | hypothetical protein | |||
| > sarg:HKX69_04730(?) | 335 | 85.4 | 2012 | 0 | -- | - | |||
| > spav:Spa2297_27915(346) | 346 | 82.7 | 2012 | 8 | <> | ATP-dependent DNA ligase | |||
| > sho:SHJGH_7372(335) | 335 | 85.1 | 2010 | 4 | -> | hypothetical protein | |||
| > shy:SHJG_7611(335) | 335 | 85.1 | 2010 | 4 | -> | hypothetical protein | |||
| > sxt:KPP03845_106085(351) | 336 | 83.3 | 2009 | 1 | -> | ligD_2; Multifunctional non-homologous end joining protein LigD | |||
| > spac:B1H29_05705(341) | 335 | 84.5 | 2008 | 4 | <- | ATP-dependent DNA ligase | |||
| > strd:NI25_04860(341) | 340 | 83.5 | 2008 | 4 | <- | ATP-dependent DNA ligase | |||
| > sfug:CNQ36_30775(341) | 341 | 83.6 | 2003 | 7 | <> | ATP-dependent DNA ligase | |||
| > samb:SAM23877_6362(341) | 335 | 83.6 | 2002 | 3 | <> | hypothetical protein | |||
| > stee:F3L20_14785(340) | 340 | 83.8 | 2002 | 0 | <> | DNA polymerase domain-containing protein | |||
| > slx:SLAV_07660(339) | 336 | 83.6 | 2001 | 2 | -> | ykoU1; putative ATP-dependent DNA ligase YkoU | |||
| > snf:JYK04_06827(339) | 336 | 83.0 | 2000 | 3 | -> | ligD_2; Multifunctional non-homologous end joining protein LigD | |||
| > shk:J2N69_32460(343) | 333 | 84.4 | 1994 | 1 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > splu:LK06_028415(335) | 335 | 84.2 | 1987 | 3 | -> | ATP-dependent DNA ligase | |||
| > sgk:PET44_26435(?) | 336 | 82.1 | 1986 | 0 | -- | - | |||
| > speu:CGZ69_31465(337) | 341 | 81.8 | 1978 | 4 | -> | ATP-dependent DNA ligase | |||
| > syan:NRK68_28455(339) | 333 | 82.9 | 1978 | 1 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > sfk:KY5_7049(343) | 334 | 82.9 | 1974 | 6 | -> | ATP-dependent DNA ligase | |||
| > ska:CP970_04815(343) | 335 | 82.7 | 1973 | 8 | -> | ATP-dependent DNA ligase | |||
| > strm:M444_27905(332) | 333 | 82.3 | 1968 | 3 | -> | ATP-dependent DNA ligase | |||
| > salw:CP975_30950(343) | 333 | 82.9 | 1959 | 5 | -> | ATP-dependent DNA ligase | |||
| > sspb:CP982_33870(340) | 337 | 82.2 | 1959 | 4 | <> | ATP-dependent DNA ligase | |||
| > sgx:H4W23_32420(347) | 333 | 83.2 | 1957 | 4 | -> | DNA polymerase domain-containing protein | |||
| > ssub:CP968_06615(352) | 336 | 81.5 | 1956 | 3 | -> | ATP-dependent DNA ligase | |||
| > sfb:CP974_26715(335) | 336 | 82.4 | 1953 | 5 | -> | ATP-dependent DNA ligase | |||
| > sgz:C0216_10495(350) | 338 | 81.4 | 1953 | 4 | -> | ATP-dependent DNA ligase | |||
| > sseo:D0Z67_24560(340) | 340 | 80.0 | 1952 | 4 | -> | ATP-dependent DNA ligase | |||
| > sve:SVEN_6395(343) | 333 | 83.2 | 1951 | 4 | -> | ATP-dependent DNA ligase | |||
| > staa:LDH80_08040(342) | 333 | 82.9 | 1950 | 4 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > slk:SLUN_33850(336) | 337 | 80.7 | 1941 | 2 | <> | ATP-dependent DNA ligase | |||
| > sfp:QUY26_06030(?) | 336 | 81.0 | 1939 | 0 | -- | - | |||
| > saov:G3H79_04910(339) | 336 | 80.1 | 1938 | 4 | <> | DNA polymerase domain-containing protein | |||
| > svn:CP980_06115(352) | 333 | 80.8 | 1934 | 1 | -> | ATP-dependent DNA ligase | |||
| > srn:A4G23_04998(331) | 332 | 82.2 | 1927 | 5 | -> | ykoU; putative ATP-dependent DNA ligase YkoU | |||
| > ssia:A7J05_05395(343) | 334 | 80.8 | 1927 | 3 | <- | ATP-dependent DNA ligase | |||
| > sroc:RGF97_03870(?) | 333 | 81.7 | 1926 | 0 | -- | - | |||
| > sdur:M4V62_07985(337) | 335 | 80.9 | 1924 | 3 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > stir:DDW44_26985(373) | 343 | 79.6 | 1923 | 38 | -> | ATP-dependent DNA ligase | |||
| > sxn:IAG42_05605(343) | 339 | 80.5 | 1918 | 4 | <> | DNA polymerase domain-containing protein | |||
| > slau:SLA_6344(331) | 332 | 81.3 | 1916 | 4 | -> | ATP-dependent DNA ligase | |||
| > spri:SPRI_1067(337) | 338 | 80.5 | 1916 | 2 | -> | DNA polymerase LigD polymerase subunit | |||
| > ssx:SACTE_5877(337) | 338 | 79.6 | 1913 | 2 | -> | DNA polymerase LigD, polymerase domain protein | |||
| > src:M271_07565(334) | 335 | 80.3 | 1912 | 10 | -> | ATP-dependent DNA ligase | |||
| > sclf:BB341_03015(338) | 335 | 80.0 | 1909 | 2 | <> | ATP-dependent DNA ligase | |||