KEGG   PATHWAY: alim00970
Entry
alim00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Austrofundulus limnaeus (annual killifish)
Class
Genetic Information Processing; Translation
Pathway map
alim00970  Aminoacyl-tRNA biosynthesis
alim00970

Organism
Austrofundulus limnaeus (annual killifish) [GN:alim]
Gene
106511114  [KO:K01889] [EC:6.1.1.20]
106513385  gars; glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
106514492  mars2; methionine--tRNA ligase, mitochondrial [KO:K01874] [EC:6.1.1.10]
106514676  rars; arginine--tRNA ligase, cytoplasmic [KO:K01887] [EC:6.1.1.19]
106514713  iars; isoleucine--tRNA ligase, cytoplasmic [KO:K01870] [EC:6.1.1.5]
106514741  mars; methionine--tRNA ligase, cytoplasmic isoform X1 [KO:K01874] [EC:6.1.1.10]
106514863  sepsecs; O-phosphoseryl-tRNA(Sec) selenium transferase [KO:K03341] [EC:2.9.1.2]
106515083  tars2; threonine--tRNA ligase, mitochondrial [KO:K01868] [EC:6.1.1.3]
106516589  pstk; L-seryl-tRNA(Sec) kinase [KO:K10837] [EC:2.7.1.164]
106516837  pars2; probable proline--tRNA ligase, mitochondrial [KO:K01881] [EC:6.1.1.15]
106518895  iars2; isoleucine--tRNA ligase, mitochondrial isoform X1 [KO:K01870] [EC:6.1.1.5]
106518934  qrsl1; glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial [KO:K02433] [EC:6.3.5.6 6.3.5.7]
106519879  tars; threonine--tRNA ligase, cytoplasmic [KO:K01868] [EC:6.1.1.3]
106520593  nars2; probable asparagine--tRNA ligase, mitochondrial [KO:K01893] [EC:6.1.1.22]
106521036  vars; valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
106521696  gatc; glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial [KO:K02435] [EC:6.3.5.6 6.3.5.7]
106522223  wars; tryptophan--tRNA ligase, cytoplasmic [KO:K01867] [EC:6.1.1.2]
106522711  ears2; probable glutamate--tRNA ligase, mitochondrial [KO:K01885] [EC:6.1.1.17]
106522934  qars; glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
106523277  farsb; phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
106524266  eprs; bifunctional glutamate/proline--tRNA ligase [KO:K14163] [EC:6.1.1.17 6.1.1.15]
106524911  dars2; aspartate--tRNA ligase, mitochondrial isoform X1 [KO:K01876] [EC:6.1.1.12]
106524946  lars; leucine--tRNA ligase, cytoplasmic [KO:K01869] [EC:6.1.1.4]
106525683  rars2; probable arginine--tRNA ligase, mitochondrial [KO:K01887] [EC:6.1.1.19]
106525765  dars; aspartate--tRNA ligase, cytoplasmic [KO:K22503] [EC:6.1.1.12]
106526108  aars; alanine--tRNA ligase, cytoplasmic [KO:K01872] [EC:6.1.1.7]
106526170  gatb; glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
106526493  yars; tyrosine--tRNA ligase, cytoplasmic [KO:K01866] [EC:6.1.1.1]
106527005  sars; serine--tRNA ligase, cytoplasmic [KO:K01875] [EC:6.1.1.11]
106527903  lars2; probable leucine--tRNA ligase, mitochondrial isoform X1 [KO:K01869] [EC:6.1.1.4]
106528188  yars2; tyrosine--tRNA ligase, mitochondrial [KO:K01866] [EC:6.1.1.1]
106530473  [KO:K01868] [EC:6.1.1.3]
106530889  nars; asparagine--tRNA ligase, cytoplasmic isoform X1 [KO:K01893] [EC:6.1.1.22]
106531006  vars2; valine--tRNA ligase, mitochondrial [KO:K01873] [EC:6.1.1.9]
106531390  kars; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
106531917  [KO:K01867] [EC:6.1.1.2]
106532402  aars2; alanine--tRNA ligase, mitochondrial [KO:K01872] [EC:6.1.1.7]
106533389  fars2; phenylalanine--tRNA ligase, mitochondrial [KO:K01889] [EC:6.1.1.20]
106533432  cars; cysteine--tRNA ligase, cytoplasmic [KO:K01883] [EC:6.1.1.16]
106533535  [KO:K01892] [EC:6.1.1.21]
106534633  [KO:K01889] [EC:6.1.1.20]
106535124  [KO:K01889] [EC:6.1.1.20]
106535324  [KO:K01883] [EC:6.1.1.16]
106536013  hars; histidine--tRNA ligase, cytoplasmic isoform X1 [KO:K01892] [EC:6.1.1.21]
106536948  sars2; serine--tRNA ligase, mitochondrial [KO:K01875] [EC:6.1.1.11]
106537239  [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
alim00250  Alanine, aspartate and glutamate metabolism
alim00260  Glycine, serine and threonine metabolism
alim00270  Cysteine and methionine metabolism
alim00290  Valine, leucine and isoleucine biosynthesis
alim00330  Arginine and proline metabolism
alim00340  Histidine metabolism
alim00380  Tryptophan metabolism
alim00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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