KEGG   PATHWAY: bmj00630
Entry
bmj00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Burkholderia multivorans ATCC 17616 (Tohoku)
Class
Metabolism; Carbohydrate metabolism
Pathway map
bmj00630  Glyoxylate and dicarboxylate metabolism
bmj00630

Module
bmj_M00012  Glyoxylate cycle [PATH:bmj00630]
bmj_M00621  Glycine cleavage system [PATH:bmj00630]
Other DBs
GO: 0046487 0043648
Organism
Burkholderia multivorans ATCC 17616 (Tohoku) [GN:bmj]
Gene
BMULJ_02018  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
BMULJ_02173  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
BMULJ_01250  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
BMULJ_05550  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
BMULJ_06153  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
BMULJ_04860  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
BMULJ_02022  glcB; malate synthase [KO:K01638] [EC:2.3.3.9]
BMULJ_05336  glcB; malate synthase [KO:K01638] [EC:2.3.3.9]
BMULJ_03862  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BMULJ_02499  gltA; citrate synthase I [KO:K01647] [EC:2.3.3.1]
BMULJ_03869  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
BMULJ_03858  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
BMULJ_03368  acnB; aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
BMULJ_06151  atoB; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BMULJ_01758  atoB; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BMULJ_01873  fadA; acetyl-CoA acyltransferase [KO:K00626] [EC:2.3.1.9]
BMULJ_00771  fadA; acetyl-CoA acyltransferase [KO:K00626] [EC:2.3.1.9]
BMULJ_06133  atoB; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BMULJ_02717  atoB; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
BMULJ_05630  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
BMULJ_05765  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
BMULJ_01757  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
BMULJ_02716  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
BMULJ_00586  glcD; (S)-2-hydroxy-acid oxidase [KO:K00104] [EC:1.1.99.14]
BMULJ_00585  glcD; (S)-2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
BMULJ_00584  glcD; (S)-2-hydroxy-acid oxidase [KO:K11473] [EC:1.1.99.14]
BMULJ_01238  katE; catalase [KO:K03781] [EC:1.11.1.6]
BMULJ_00065  catalase [KO:K03781] [EC:1.11.1.6]
BMULJ_00280  serA; D-3-phosphoglycerate dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BMULJ_01714  gluconate 2-dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BMULJ_01041  gyaR; glyoxylate reductase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BMULJ_01050  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
BMULJ_00374  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
BMULJ_04789  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
BMULJ_00244  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BMULJ_02133  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BMULJ_02149  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BMULJ_04797  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BMULJ_00657  glyA; glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BMULJ_04971  glyA; glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BMULJ_03124  gcvP; glycine dehydrogenase subunit 1 [KO:K00281] [EC:1.4.4.2]
BMULJ_03122  gcvT; aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
BMULJ_01495  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BMULJ_02119  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BMULJ_04552  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BMULJ_03123  gcvH; glycine cleavage system H protein [KO:K02437]
BMULJ_01847  gcl; tartronate-semialdehyde synthase [KO:K01608] [EC:4.1.1.47]
BMULJ_01848  gip; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
BMULJ_01849  garR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
BMULJ_01898  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
BMULJ_05503  ttuC; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BMULJ_03204  ttuC; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BMULJ_03491  ttuC; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BMULJ_00515  eda; 2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BMULJ_06076  fdh; formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
BMULJ_00874  fdsD; formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
BMULJ_00875  fdhA; formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
BMULJ_03913  fdhA; formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
BMULJ_00876  NADH dehydrogenase [KO:K00124]
BMULJ_03914  fdhB; formate dehydrogenase beta subunit [KO:K00124]
BMULJ_00877  fdhC; formate dehydrogenase gamma subunit [KO:K00127]
BMULJ_03915  fdhC; formate dehydrogenase gamma subunit [KO:K00127]
BMULJ_02540  kynB; N-formyl-L-kynurenine/N-Formylanthranilate amidohydrolase [KO:K07130] [EC:3.5.1.9]
BMULJ_02725  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BMULJ_04952  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BMULJ_02152  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bmj00010  Glycolysis / Gluconeogenesis
bmj00020  Citrate cycle (TCA cycle)
bmj00030  Pentose phosphate pathway
bmj00053  Ascorbate and aldarate metabolism
bmj00071  Fatty acid degradation
bmj00230  Purine metabolism
bmj00250  Alanine, aspartate and glutamate metabolism
bmj00260  Glycine, serine and threonine metabolism
bmj00620  Pyruvate metabolism
bmj00710  Carbon fixation by Calvin cycle
bmj00750  Vitamin B6 metabolism
bmj00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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