KEGG   PATHWAY: bot00010
Entry
bot00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Bradyrhizobium ottawaense
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bot00010  Glycolysis / Gluconeogenesis
bot00010

Module
bot_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bot00010]
bot_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bot00010]
bot_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bot00010]
Other DBs
GO: 0006096 0006094
Organism
Bradyrhizobium ottawaense [GN:bot]
Gene
CIT37_00695  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
CIT37_05860  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
CIT37_05865  [KO:K00927] [EC:2.7.2.3]
CIT37_05870  fba; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
CIT37_05875  [KO:K01623] [EC:4.1.2.13]
CIT37_06825  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CIT37_06830  [KO:K00627] [EC:2.3.1.12]
CIT37_06835  mdeB; alpha-ketoglutarate dehydrogenase [KO:K00163] [EC:1.2.4.1]
CIT37_07155  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
CIT37_08235  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
CIT37_08445  [KO:K15778] [EC:5.4.2.8 5.4.2.2]
CIT37_10950  [KO:K01834] [EC:5.4.2.11]
CIT37_11545  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CIT37_12205  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CIT37_15095  [KO:K15778] [EC:5.4.2.8 5.4.2.2]
CIT37_15820  [KO:K01610] [EC:4.1.1.49]
CIT37_16370  [KO:K20866] [EC:3.1.3.10]
CIT37_17205  [KO:K00128] [EC:1.2.1.3]
CIT37_18395  [KO:K01895] [EC:6.2.1.1]
CIT37_19450  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CIT37_20840  [KO:K13810] [EC:2.2.1.2 5.3.1.9]
CIT37_20910  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
CIT37_20915  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
CIT37_23130  [KO:K00114] [EC:1.1.2.8]
CIT37_23155  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
CIT37_23200  [KO:K00114] [EC:1.1.2.8]
CIT37_26065  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
CIT37_30050  [KO:K20866] [EC:3.1.3.10]
CIT37_30155  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
CIT37_30215  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
CIT37_30245  adh; aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
CIT37_30250  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
CIT37_30255  [KO:K00162] [EC:1.2.4.1]
CIT37_30270  [KO:K00627] [EC:2.3.1.12]
CIT37_30280  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CIT37_31140  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
CIT37_32355  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
CIT37_33550  [KO:K13953] [EC:1.1.1.1]
CIT37_34195  [KO:K01895] [EC:6.2.1.1]
CIT37_35895  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CIT37_35900  [KO:K00627] [EC:2.3.1.12]
CIT37_37495  [KO:K01785] [EC:5.1.3.3]
CIT37_39485  [KO:K00128] [EC:1.2.1.3]
CIT37_39490  [KO:K00163] [EC:1.2.4.1]
CIT37_39680  [KO:K13953] [EC:1.1.1.1]
CIT37_40740  fba; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
CIT37_40755  [KO:K03841] [EC:3.1.3.11]
CIT37_41015  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
CIT37_42070  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
bot00020  Citrate cycle (TCA cycle)
bot00030  Pentose phosphate pathway
bot00500  Starch and sucrose metabolism
bot00620  Pyruvate metabolism
bot00640  Propanoate metabolism
bot00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

DBGET integrated database retrieval system