KEGG   PATHWAY: brad00010
Entry
brad00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Bradyrhizobium sp. BF49
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
brad00010  Glycolysis / Gluconeogenesis
brad00010

Module
brad_M00002  Glycolysis, core module involving three-carbon compounds [PATH:brad00010]
brad_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:brad00010]
brad_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:brad00010]
Other DBs
GO: 0006096 0006094
Organism
Bradyrhizobium sp. BF49 [GN:brad]
Gene
BF49_6945  Glucokinase EC 2712 [KO:K00845] [EC:2.7.1.2]
BF49_4894  Transaldolase EC 2212 Glucose6phosphate isomerase EC 5319 [KO:K13810] [EC:2.2.1.2 5.3.1.9]
BF49_2164  Fructose16bisphosphatase type I EC 31311 [KO:K03841] [EC:3.1.3.11]
BF49_0688  Fructose16bisphosphatase GlpX type EC 31311 [KO:K11532] [EC:3.1.3.11 3.1.3.37]
BF49_4298  Fructosebisphosphate aldolase class I EC 41213 [KO:K01623] [EC:4.1.2.13]
BF49_4299  Fructosebisphosphate aldolase class II EC 41213 [KO:K01624] [EC:4.1.2.13]
BF49_2161  Fructosebisphosphate aldolase class II EC 41213 [KO:K01624] [EC:4.1.2.13]
BF49_6739  Triosephosphate isomerase EC 5311 [KO:K01803] [EC:5.3.1.1]
BF49_4301  NADPHdependent glyceraldehyde3phosphate dehydrogenase EC 12113 NADdependent glyceraldehyde3phosphate dehydrogenase EC 12112 [KO:K00134] [EC:1.2.1.12]
BF49_4300  Phosphoglycerate kinase EC 2723 [KO:K00927] [EC:2.7.2.3]
BF49_0155  Phosphoglycerate mutase EC 5421 [KO:K01834] [EC:5.4.2.11]
BF49_6749  Enolase EC 42111 [KO:K01689] [EC:4.2.1.11]
BF49_4394  Pyruvate kinase EC 27140 [KO:K00873] [EC:2.7.1.40]
BF49_2250  Pyruvatephosphate dikinase EC 2791 [KO:K01006] [EC:2.7.9.1]
BF49_1868  Pyruvate dehydrogenase E1 component EC 1241 [KO:K00163] [EC:1.2.4.1]
BF49_6758  Pyruvate dehydrogenase E1 component alpha subunit EC 1241 [KO:K00161] [EC:1.2.4.1]
BF49_6759  Pyruvate dehydrogenase E1 component beta subunit EC 1241 Branchedchain alphaketo acid dehydrogenase E1 component beta subunit EC 1244 [KO:K00162] [EC:1.2.4.1]
BF49_6762  Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex EC 23112 Dihydrolipoamide acyltransferase component of branchedchain alphaketo acid dehydrogenase complex EC 231168 [KO:K00627] [EC:2.3.1.12]
BF49_6764  Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex EC 1814 [KO:K00382] [EC:1.8.1.4]
BF49_0410  Dihydrolipoamide dehydrogenase of 2oxoglutarate dehydrogenase EC 1814 [KO:K00382] [EC:1.8.1.4]
BF49_4909  2oxoglutarate oxidoreductase alpha subunit EC 1273 [KO:K00174] [EC:1.2.7.3 1.2.7.11]
BF49_4908  2oxoglutarate oxidoreductase beta subunit EC 1273 [KO:K00175] [EC:1.2.7.3 1.2.7.11]
BF49_4089  Alcohol dehydrogenase EC 1111 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BF49_5355  Shydroxymethylglutathione dehydrogenase EC 111284 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BF49_5361  Shydroxymethylglutathione dehydrogenase EC 111284 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BF49_1904  Alcohol dehydrogenase EC 1111 [KO:K13953] [EC:1.1.1.1]
BF49_0969  Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
BF49_5350  Methanol dehydrogenase large subunit protein EC 11998 [KO:K00114] [EC:1.1.2.8]
BF49_5373  Glucose dehydrogenase PQQdependent EC 1152 [KO:K00114] [EC:1.1.2.8]
BF49_1867  Aldehyde dehydrogenase EC 1213 [KO:K00128] [EC:1.2.1.3]
BF49_3132  Aldehyde dehydrogenase EC 1213 [KO:K00128] [EC:1.2.1.3]
BF49_1272  Aldehyde dehydrogenase EC 1213 [KO:K00128] [EC:1.2.1.3]
BF49_6756  Aldehyde dehydrogenase EC 1213 [KO:K00138] [EC:1.2.1.-]
BF49_0267  Acetylcoenzyme A synthetase EC 6211 [KO:K01895] [EC:6.2.1.1]
BF49_1094  Acetylcoenzyme A synthetase EC 6211 [KO:K01895] [EC:6.2.1.1]
BF49_2879  Acetylcoenzyme A synthetase EC 6211 [KO:K01895] [EC:6.2.1.1]
BF49_0637  AcetylCoA synthetase ADPforming alpha and beta chains putative [KO:K24012] [EC:6.2.1.13]
BF49_1479  Aldose 1epimerase EC 5133 [KO:K01785] [EC:5.1.3.3]
BF49_3302  hypothetical protein [KO:K20866] [EC:3.1.3.10]
BF49_6731  AlphaDglucose1phosphatase [KO:K20866] [EC:3.1.3.10]
BF49_2415  Phosphoglucomutase EC 5422 [KO:K01835] [EC:5.4.2.2]
BF49_3501  Phosphoglucosamine mutase EC 54210 Phosphomannomutase EC 5428 [KO:K15778] [EC:5.4.2.8 5.4.2.2]
BF49_3959  Phosphoenolpyruvate carboxykinase ATP EC 41149 [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
brad00020  Citrate cycle (TCA cycle)
brad00030  Pentose phosphate pathway
brad00500  Starch and sucrose metabolism
brad00620  Pyruvate metabolism
brad00640  Propanoate metabolism
brad00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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