KEGG   PATHWAY: bxh00030
Entry
bxh00030                    Pathway                                
Name
Pentose phosphate pathway - Bacillus amyloliquefaciens XH7
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bxh00030  Pentose phosphate pathway
bxh00030

Module
bxh_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:bxh00030]
bxh_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:bxh00030]
bxh_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:bxh00030]
bxh_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bxh00030]
bxh_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:bxh00030]
Other DBs
GO: 0006098
Organism
Bacillus amyloliquefaciens XH7 [GN:bxh]
Gene
BAXH7_03183  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
BAXH7_02495  zwf; glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
BAXH7_02172  ykgB; putative 6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
BAXH7_02497  yqjI; 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
BAXH7_01882  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
BAXH7_01661  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
BAXH7_03849  tal; putative translaldolase [KO:K00616] [EC:2.2.1.2]
BAXH7_03828  ywlF; ribose-5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
BAXH7_00321  hxlA; 3-hexulose-6-phosphate synthase (HPS) [KO:K08093] [EC:4.1.2.43]
BAXH7_00320  hxlB; 6-phospho-3-hexuloisomerase (PHI) [KO:K08094] [EC:5.3.1.27]
BAXH7_04086  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
BAXH7_03722  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
BAXH7_02455  hypothetical protein [KO:K01839] [EC:5.4.2.7]
BAXH7_00907  yhxB; putative phosphomannomutase [KO:K01835] [EC:5.4.2.2]
BAXH7_00056  prs; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
BAXH7_00379  gdh; glucose-1-dehydrogenase [KO:K00034] [EC:1.1.1.47]
BAXH7_00268  ycdF; putative dehydrogenase [KO:K00034] [EC:1.1.1.47]
BAXH7_03597  yvcT; putative 2-hydroxyacid dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BAXH7_03543  gntK; gluconate kinase [KO:K25031] [EC:2.7.1.12]
BAXH7_03850  fbaA; fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
BAXH7_03847  glpX; fructose 1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
BAXH7_04136  fbp; fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
BAXH7_02935  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
bxh00010  Glycolysis / Gluconeogenesis
bxh00040  Pentose and glucuronate interconversions
bxh00052  Galactose metabolism
bxh00230  Purine metabolism
bxh00240  Pyrimidine metabolism
bxh00340  Histidine metabolism
bxh00630  Glyoxylate and dicarboxylate metabolism
bxh00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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