KEGG   PATHWAY: bxh00630
Entry
bxh00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Bacillus amyloliquefaciens XH7
Class
Metabolism; Carbohydrate metabolism
Pathway map
bxh00630  Glyoxylate and dicarboxylate metabolism
bxh00630

Module
bxh_M00621  Glycine cleavage system [PATH:bxh00630]
Other DBs
GO: 0046487 0043648
Organism
Bacillus amyloliquefaciens XH7 [GN:bxh]
Gene
BAXH7_00014  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
BAXH7_00551  [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BAXH7_00787  acoL; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BAXH7_00853  katA; vegetative catalase 1 [KO:K03781] [EC:1.11.1.6]
BAXH7_00921  citA; citrate synthase I [KO:K01647] [EC:2.3.3.1]
BAXH7_01016  yhfS; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BAXH7_01194  oxdC1; oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
BAXH7_01650  citB; aconitate hydratase [KO:K27802]
BAXH7_01711  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BAXH7_02007  pdhD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BAXH7_02165  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BAXH7_02262  yjgC; putative formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
BAXH7_02503  yqjD; putative propionyl-CoA carboxylase beta chain (PCCase) [KO:K01966] [EC:6.4.1.3 2.1.3.15]
BAXH7_02504  yqjC; putative lyase [KO:K05606] [EC:5.1.99.1]
BAXH7_02515  lpdV; branched-chain alpha-keto acid dehydrogenase E3 subunit (dihydrolipoamide dehydrogenase) [KO:K00382] [EC:1.8.1.4]
BAXH7_02523  mmgD; citrate synthase 3 [KO:K01647] [EC:2.3.3.1]
BAXH7_02526  mmgA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BAXH7_02574  gcvPB; glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
BAXH7_02575  gcvPA; glycine dehydrogenase subunit 1 [KO:K00282] [EC:1.4.4.2]
BAXH7_02576  gcvT; glycine cleavage system aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
BAXH7_02732  yrhE; putative formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
BAXH7_02887  ysfC; putative glycolate oxidase subunit [KO:K00104] [EC:1.1.99.14]
BAXH7_02888  ysfD; putative glycolate oxidase subunit [KO:K11473] [EC:1.1.99.14]
BAXH7_02928  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BAXH7_02930  citZ; citrate synthase [KO:K01659] [EC:2.3.3.5]
BAXH7_02962  ytcI; putative acyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
BAXH7_02990  acsA; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
BAXH7_03388  gcvH; glycine cleavage system protein H [KO:K02437]
BAXH7_03438  oxdC; oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
BAXH7_03548  [KO:K05825] [EC:2.6.1.-]
BAXH7_03597  yvcT; putative 2-hydroxyacid dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BAXH7_03826  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BAXH7_04019  katX; major catalase in spores [KO:K03781] [EC:1.11.1.6]
BAXH7_04047  katE; catalase 2 [KO:K03781] [EC:1.11.1.6]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bxh00010  Glycolysis / Gluconeogenesis
bxh00020  Citrate cycle (TCA cycle)
bxh00030  Pentose phosphate pathway
bxh00053  Ascorbate and aldarate metabolism
bxh00071  Fatty acid degradation
bxh00230  Purine metabolism
bxh00250  Alanine, aspartate and glutamate metabolism
bxh00260  Glycine, serine and threonine metabolism
bxh00270  Cysteine and methionine metabolism
bxh00620  Pyruvate metabolism
bxh00710  Carbon fixation by Calvin cycle
bxh00750  Vitamin B6 metabolism
bxh00910  Nitrogen metabolism
KO pathway
ko00630   

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