KEGG   PATHWAY: deq00240
Entry
deq00240                    Pathway                                
Name
Pyrimidine metabolism - Devosia sp. H5989
Class
Metabolism; Nucleotide metabolism
Pathway map
deq00240  Pyrimidine metabolism
deq00240

Module
deq_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:deq00240]
deq_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:deq00240]
deq_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:deq00240]
deq_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:deq00240]
Other DBs
GO: 0006220 0006213
Organism
Devosia sp. H5989 [GN:deq]
Gene
XM25_11965  Carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
XM25_11900  Carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
XM25_09185  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
XM25_09190  Dihydroorotase [KO:K01465] [EC:3.5.2.3]
XM25_01695  Dihydroorotase [KO:K01465] [EC:3.5.2.3]
XM25_06365  dihydroorotase [KO:K01465] [EC:3.5.2.3]
XM25_22470  diguanylate cyclase [KO:K00254] [EC:1.3.5.2]
XM25_05480  Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
XM25_17740  Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
XM25_05945  pyrH; Uridine monophosphate kinase [KO:K09903] [EC:2.7.4.22]
XM25_05045  ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
XM25_06660  mazG; Nucleoside triphosphate pyrophosphohydrolase MazG [KO:K04765] [EC:3.6.1.9]
XM25_17650  Maf; Septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
XM25_00165  Maf; septum formation inhibitor Maf [KO:K06287] [EC:3.6.1.-]
XM25_06110  CTP synthase [KO:K01937] [EC:6.3.4.2]
XM25_19520  Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
XM25_12640  5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
XM25_07295  hypothetical protein [KO:K03787] [EC:3.1.3.5 3.1.3.6]
XM25_15090  hypothetical protein [KO:K08723] [EC:3.1.3.-]
XM25_19230  Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
XM25_11915  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
XM25_14295  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
XM25_16680  pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
XM25_19255  Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
XM25_17920  hypothetical protein [KO:K01489] [EC:3.5.4.5]
XM25_01275  Cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
XM25_22385  2-deoxycytidine 5-triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
XM25_08275  Ribonucleotide reductase of class II (coenzyme B12-dependent) [KO:K00525] [EC:1.17.4.1]
XM25_08305  Ribonucleotide reductase of class Ib (aerobic), alpha subunit [KO:K00525] [EC:1.17.4.1]
XM25_08310  Ribonucleotide reductase of class Ib (aerobic), beta subunit [KO:K00526] [EC:1.17.4.1]
XM25_01685  hydrolase [KO:K06952] [EC:3.1.3.89]
XM25_06640  Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
XM25_18330  deoxyuridine 5'-triphosphatenucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
XM25_19240  Thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
XM25_12080  Thymidine kinase [KO:K00857] [EC:2.7.1.21]
XM25_10970  Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
XM25_18055  dihydropyrimidine dehydrogenase [KO:K17722] [EC:1.3.1.1]
XM25_18050  Dihydropyrimidine dehydrogenase [NADP+] [KO:K17723] [EC:1.3.1.1]
XM25_17995  Dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
XM25_20550  allantoate amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
XM25_18005  allantoate amidohydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
XM25_03685  flavin reductase [KO:K09024] [EC:1.5.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
deq00030  Pentose phosphate pathway
deq00220  Arginine biosynthesis
deq00250  Alanine, aspartate and glutamate metabolism
deq00280  Valine, leucine and isoleucine degradation
deq00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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