KEGG   PATHWAY: dhi00010
Entry
dhi00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Dermatobacter hominis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dhi00010  Glycolysis / Gluconeogenesis
dhi00010

Module
dhi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dhi00010]
dhi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dhi00010]
dhi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dhi00010]
dhi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dhi00010]
Other DBs
GO: 0006096 0006094
Organism
Dermatobacter hominis [GN:dhi]
Gene
LH044_00030  ROK family protein [KO:K25026] [EC:2.7.1.2]
LH044_00135  ROK family protein [KO:K25026] [EC:2.7.1.2]
LH044_18560  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
LH044_20095  hypothetical protein [KO:K15916] [EC:5.3.1.9 5.3.1.8]
LH044_00055  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
LH044_06400  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
LH044_01590  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
LH044_04200  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
LH044_04210  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
LH044_04205  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
LH044_12265  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
LH044_06730  apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
LH044_09135  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
LH044_02620  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
LH044_19565  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
LH044_19695  sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase [KO:K00627] [EC:2.3.1.12]
LH044_19690  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LH044_15820  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
LH044_15825  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
LH044_09605  NDMA-dependent alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
LH044_03595  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
LH044_07625  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
LH044_10410  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
LH044_18855  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
LH044_11185  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LH044_17000  hypothetical protein [KO:K01785] [EC:5.1.3.3]
LH044_05060  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dhi00020  Citrate cycle (TCA cycle)
dhi00030  Pentose phosphate pathway
dhi00500  Starch and sucrose metabolism
dhi00620  Pyruvate metabolism
dhi00640  Propanoate metabolism
dhi00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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