KEGG   PATHWAY: dwd00010
Entry
dwd00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Desulfosarcina widdelii
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dwd00010  Glycolysis / Gluconeogenesis
dwd00010

Module
dwd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dwd00010]
dwd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dwd00010]
dwd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dwd00010]
dwd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dwd00010]
Other DBs
GO: 0006096 0006094
Organism
Desulfosarcina widdelii [GN:dwd]
Gene
DSCW_00440  acsA_1; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DSCW_05640  nifJ2; pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.8.1]
DSCW_09890  acs; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DSCW_10160  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DSCW_10430  korA_1; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DSCW_10440  korB_1; 2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DSCW_12440  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DSCW_12450  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DSCW_12710  gap; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DSCW_12720  tpi; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
DSCW_14450  [KO:K24012]
DSCW_15370  pfkA; ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
DSCW_15410  [KO:K01624] [EC:4.1.2.13]
DSCW_15580  [KO:K15635] [EC:5.4.2.12]
DSCW_16700  [KO:K00895] [EC:2.7.1.90]
DSCW_17450  [KO:K01895] [EC:6.2.1.1]
DSCW_18720  korB_2; 2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DSCW_18730  korA_2; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DSCW_19400  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DSCW_20350  [KO:K01895] [EC:6.2.1.1]
DSCW_20370  acsA_2; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DSCW_25240  eno; enolase [KO:K01689] [EC:4.2.1.11]
DSCW_26900  [KO:K01006] [EC:2.7.9.1]
DSCW_26910  [KO:K00134] [EC:1.2.1.12]
DSCW_28750  [KO:K01007] [EC:2.7.9.2]
DSCW_31610  pmm; phosphomannomutase [KO:K01835] [EC:5.4.2.2]
DSCW_32120  [KO:K00873] [EC:2.7.1.40]
DSCW_36070  [KO:K24012]
DSCW_37840  lpdA-1; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DSCW_37960  [KO:K01905] [EC:6.2.1.13]
DSCW_39450  [KO:K24012]
DSCW_43520  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DSCW_43530  [KO:K00627] [EC:2.3.1.12]
DSCW_43540  [KO:K00163] [EC:1.2.4.1]
DSCW_49550  acsA_3; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DSCW_49980  [KO:K13953] [EC:1.1.1.1]
DSCW_51240  [KO:K22224] [EC:6.2.1.13]
DSCW_51280  [KO:K01905] [EC:6.2.1.13]
DSCW_52520  [KO:K01895] [EC:6.2.1.1]
DSCW_53770  [KO:K01006] [EC:2.7.9.1]
DSCW_53890  [KO:K01596] [EC:4.1.1.32]
DSCW_54190  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
DSCW_54720  [KO:K24012]
DSCW_55420  [KO:K00873] [EC:2.7.1.40]
DSCW_57600  [KO:K01622] [EC:4.1.2.13 3.1.3.11]
DSCW_57610  pfk-2; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
DSCW_58690  [KO:K24012]
DSCW_58710  poR; pyruvate synthase [KO:K03737] [EC:1.2.7.1 1.2.8.1]
DSCW_62020  [KO:K00172] [EC:1.2.7.1]
DSCW_62040  porA; 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha [KO:K00169] [EC:1.2.7.1]
DSCW_62050  [KO:K00170] [EC:1.2.7.1]
DSCW_64830  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
DSCW_65170  [KO:K01007] [EC:2.7.9.2]
DSCW_66340  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DSCW_66350  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dwd00020  Citrate cycle (TCA cycle)
dwd00030  Pentose phosphate pathway
dwd00500  Starch and sucrose metabolism
dwd00620  Pyruvate metabolism
dwd00640  Propanoate metabolism
dwd00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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