KEGG   PATHWAY: ecoa00030
Entry
ecoa00030                   Pathway                                
Name
Pentose phosphate pathway - Escherichia coli APEC O78 (APEC)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ecoa00030  Pentose phosphate pathway
ecoa00030

Module
ecoa_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ecoa00030]
ecoa_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ecoa00030]
ecoa_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ecoa00030]
ecoa_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ecoa00030]
ecoa_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ecoa00030]
ecoa_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ecoa00030]
ecoa_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ecoa00030]
Other DBs
GO: 0006098
Organism
Escherichia coli APEC O78 (APEC) [GN:ecoa]
Gene
APECO78_00925  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
APECO78_13075  glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
APECO78_07330  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
APECO78_13880  6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
APECO78_20720  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
APECO78_16020  transketolase [KO:K00615] [EC:2.2.1.1]
APECO78_18410  transketolase [KO:K00615] [EC:2.2.1.1]
APECO78_03495  transaldolase B [KO:K00616] [EC:2.2.1.2]
APECO78_16015  transaldolase A [KO:K00616] [EC:2.2.1.2]
APECO78_18280  ribose-5-phosphate isomerase A [KO:K01807] [EC:5.3.1.6]
APECO78_01375  ribose-5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
APECO78_03350  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
APECO78_22650  ribokinase [KO:K00852] [EC:2.7.1.15]
APECO78_03365  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
APECO78_20690  putative mutase [KO:K01839] [EC:5.4.2.7]
APECO78_06985  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
APECO78_01395  ribose 1,5-bisphosphokinase [KO:K05774] [EC:2.7.4.23]
APECO78_09910  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
APECO78_13070  phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
APECO78_13065  keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
APECO78_04060  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
APECO78_21575  2-ketoaldonate reductase/glyoxylate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
APECO78_02310  thermosensitive gluconokinase [KO:K00851] [EC:2.7.1.12]
APECO78_20975  gluconate kinase [KO:K00851] [EC:2.7.1.12]
APECO78_21420  ketodeoxygluconokinase KdgK [KO:K00874] [EC:2.7.1.45]
APECO78_14195  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
APECO78_18340  Fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
APECO78_02130  fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
APECO78_00380  glpX; fructose 1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
APECO78_18390  fructose-1,6-bisphosphatase II-like protein [KO:K02446] [EC:3.1.3.11]
APECO78_00335  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
APECO78_12445  6-phosphofructokinase 2 [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ecoa00010  Glycolysis / Gluconeogenesis
ecoa00040  Pentose and glucuronate interconversions
ecoa00052  Galactose metabolism
ecoa00230  Purine metabolism
ecoa00240  Pyrimidine metabolism
ecoa00340  Histidine metabolism
ecoa00630  Glyoxylate and dicarboxylate metabolism
ecoa00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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