KEGG   PATHWAY: fcy00010
Entry
fcy00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Fragilariopsis cylindrus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
fcy00010  Glycolysis / Gluconeogenesis
fcy00010

Module
fcy_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:fcy00010]
fcy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:fcy00010]
fcy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:fcy00010]
Other DBs
GO: 0006096 0006094
Organism
Fragilariopsis cylindrus [GN:fcy]
Gene
FRACYDRAFT_216851  GLK2; glucokinase [KO:K00845] [EC:2.7.1.2]
FRACYDRAFT_235074  G6PI2; putative glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
FRACYDRAFT_240160  G6PI1; putative glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
FRACYDRAFT_291634  G6PI3; putative glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
FRACYDRAFT_273844  ATP-PFK1; phosphofructokinase [KO:K00850] [EC:2.7.1.11]
FRACYDRAFT_263182  PPi-PFK1; phosphofructokinase [KO:K00895] [EC:2.7.1.90]
FRACYDRAFT_291638  FBP6; putative fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
FRACYDRAFT_264445  FBP4; putative chloroplast fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
FRACYDRAFT_170890  FBP3; cytosolic fructose-1,6-bishosphatase [KO:K03841] [EC:3.1.3.11]
FRACYDRAFT_236085  FBP5; putative fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
FRACYDRAFT_261561  FBP2; putative fructose-1,6-bishosphatase [KO:K03841] [EC:3.1.3.11]
FRACYDRAFT_241883  FBP1; putative fructose-1,6-bishosphatase [KO:K03841] [EC:3.1.3.11]
FRACYDRAFT_275433  FBP7_1; putative fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
FRACYDRAFT_179823  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
FRACYDRAFT_182808  fructose-1,6-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
FRACYDRAFT_191311  fructose-bisphosphate aldolase, class I [KO:K01623] [EC:4.1.2.13]
FRACYDRAFT_258994  hypothetical protein [KO:K01624] [EC:4.1.2.13]
FRACYDRAFT_269285  fructose-1,6-biphosphate aldolase precursor [KO:K01624] [EC:4.1.2.13]
FRACYDRAFT_206976  fructose-1,6-bisphosphate aldolase precursor [KO:K01624] [EC:4.1.2.13]
FRACYDRAFT_274452  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
FRACYDRAFT_240596  Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
FRACYDRAFT_270428  GAPDH2B; glyceraldehyde-3-phosphate dehydrogenase precursor [KO:K00134] [EC:1.2.1.12]
FRACYDRAFT_275634  TIM_GAPDH1; triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase precursor [KO:K00134] [EC:1.2.1.12]
FRACYDRAFT_275635  GAPDH1; mitochondrial glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
FRACYDRAFT_269867  GAPDH4; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
FRACYDRAFT_173478  GAPDH2A; glyceraldehyde-3-phosphate dehydrogenase precursor [KO:K00134] [EC:1.2.1.12]
FRACYDRAFT_222778  GAPC1; glyceraldehyde-3-phosphate dehydrogenase precursor [KO:K00134] [EC:1.2.1.12]
FRACYDRAFT_208673  PGK2B; phosphoglycerate kinase precursor [KO:K00927] [EC:2.7.2.3]
FRACYDRAFT_209933  PGK2A; phosphoglycerate kinase precursor [KO:K00927] [EC:2.7.2.3]
FRACYDRAFT_209502  PKG3; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
FRACYDRAFT_210020  PGK1; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
FRACYDRAFT_211179  PGAM1; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
FRACYDRAFT_247569  hypothetical protein [KO:K01834] [EC:5.4.2.11]
FRACYDRAFT_238967  hypothetical protein [KO:K01834] [EC:5.4.2.11]
FRACYDRAFT_250143  PGAM10; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
FRACYDRAFT_239120  PGAM4; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
FRACYDRAFT_252624  hypothetical protein [KO:K01834] [EC:5.4.2.11]
FRACYDRAFT_184892  ENO3; putative enolase [KO:K01689] [EC:4.2.1.11]
FRACYDRAFT_261136  ENO2; enolase [KO:K01689] [EC:4.2.1.11]
FRACYDRAFT_168155  ENO1; putative enolase [KO:K01689] [EC:4.2.1.11]
FRACYDRAFT_206063  PK4; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FRACYDRAFT_242838  PK7; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FRACYDRAFT_224993  PK2; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FRACYDRAFT_260072  PK1; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FRACYDRAFT_274784  PK5; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
FRACYDRAFT_225939  PPDK1; pyruvate orthophosphate dikinase [KO:K01006] [EC:2.7.9.1]
FRACYDRAFT_187383  PDHE1-A; pyruvate dehydrogenase [KO:K00161] [EC:1.2.4.1]
FRACYDRAFT_225175  Thiamin diphosphate-binding protein [KO:K00162] [EC:1.2.4.1]
FRACYDRAFT_267255  single hybrid motif-containing protein [KO:K00627] [EC:2.3.1.12]
FRACYDRAFT_180836  2-oxoacid_dh-domain-containing protein [KO:K00627] [EC:2.3.1.12]
FRACYDRAFT_166615  2-oxoacid_dh-domain-containing protein [KO:K00627] [EC:2.3.1.12]
FRACYDRAFT_170993  2-oxoacid_dh-domain-containing protein [KO:K00627] [EC:2.3.1.12]
FRACYDRAFT_271375  DLDH; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FRACYDRAFT_186500  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
FRACYDRAFT_277191  ADH2; putative alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
FRACYDRAFT_208181  TMABA-DH; 4-trimethylaminobutyraldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
FRACYDRAFT_239808  ACS; acetate CoA ligase [KO:K01895] [EC:6.2.1.1]
FRACYDRAFT_254980  acetyl-CoA synthetase-like protein [KO:K01895] [EC:6.2.1.1]
FRACYDRAFT_224808  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FRACYDRAFT_140665  galactose mutarotase-like protein [KO:K01785] [EC:5.1.3.3]
FRACYDRAFT_263231  PGM2; putative chloroplast phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
FRACYDRAFT_267353  galactose mutarotase-like protein [KO:K01792] [EC:5.1.3.15]
FRACYDRAFT_209219  galactose mutarotase-like protein [KO:K01792] [EC:5.1.3.15]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
fcy00020  Citrate cycle (TCA cycle)
fcy00030  Pentose phosphate pathway
fcy00500  Starch and sucrose metabolism
fcy00620  Pyruvate metabolism
fcy00640  Propanoate metabolism
fcy00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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