KEGG   PATHWAY: gfe00230
Entry
gfe00230                    Pathway                                
Name
Purine metabolism - Geosporobacter ferrireducens
Class
Metabolism; Nucleotide metabolism
Pathway map
gfe00230  Purine metabolism
gfe00230

Module
gfe_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:gfe00230]
gfe_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gfe00230]
gfe_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gfe00230]
gfe_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gfe00230]
Other DBs
GO: 0006163 0042278
Organism
Geosporobacter ferrireducens [GN:gfe]
Gene
Gferi_06405  hypothetical protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
Gferi_00175  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Gferi_12600  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Gferi_10925  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Gferi_25635  hypothetical protein [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Gferi_16725  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Gferi_10010  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Gferi_09990  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
Gferi_10000  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Gferi_10025  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
Gferi_10005  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Gferi_10065  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
Gferi_10060  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
Gferi_10015  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Gferi_00600  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Gferi_09995  bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Gferi_26660  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Gferi_17650  multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Gferi_00080  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
Gferi_19960  purine-nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
Gferi_01890  polyphenol oxidase [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
Gferi_04250  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Gferi_02085  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Gferi_10210  IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
Gferi_18520  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Gferi_09465  non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
Gferi_16180  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
Gferi_02970  hypothetical protein [KO:K13479] [EC:1.17.1.4]
Gferi_10205  glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
Gferi_01730  guanylate kinase [KO:K00942] [EC:2.7.4.8]
Gferi_16970  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
Gferi_16215  ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
Gferi_02200  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
Gferi_26665  (p)ppGpp synthetase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Gferi_16605  hypothetical protein [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Gferi_16615  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Gferi_16800  hypothetical protein [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Gferi_14930  GTP pyrophosphokinase [KO:K07816] [EC:2.7.6.5]
Gferi_23225  GTP pyrophosphokinase [KO:K07816] [EC:2.7.6.5]
Gferi_13720  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
Gferi_08945  deoxyguanosine kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
Gferi_17495  adenylate kinase [KO:K00939] [EC:2.7.4.3]
Gferi_06085  adenylyl-sulfate kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
Gferi_06105  adenylyl-sulfate kinase [KO:K00860] [EC:2.7.1.25]
Gferi_06090  sulfate adenylyltransferase [KO:K00957] [EC:2.7.7.4]
Gferi_11655  carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
gfe00030  Pentose phosphate pathway
gfe00220  Arginine biosynthesis
gfe00250  Alanine, aspartate and glutamate metabolism
gfe00260  Glycine, serine and threonine metabolism
gfe00340  Histidine metabolism
gfe00630  Glyoxylate and dicarboxylate metabolism
gfe00730  Thiamine metabolism
gfe00740  Riboflavin metabolism
gfe00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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