KEGG   PATHWAY: hom00010
Entry
hom00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Homoserinibacter sp. YIM 151385
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
hom00010  Glycolysis / Gluconeogenesis
hom00010

Module
hom_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:hom00010]
hom_M00002  Glycolysis, core module involving three-carbon compounds [PATH:hom00010]
hom_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:hom00010]
hom_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:hom00010]
Other DBs
GO: 0006096 0006094
Organism
Homoserinibacter sp. YIM 151385 [GN:hom]
Gene
OF852_01800  ROK family protein [KO:K25026] [EC:2.7.1.2]
OF852_04015  ROK family protein [KO:K25026] [EC:2.7.1.2]
OF852_07410  ROK family protein [KO:K25026] [EC:2.7.1.2]
OF852_03145  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
OF852_09580  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
OF852_00465  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
OF852_00440  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
OF852_07350  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
OF852_03175  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
OF852_03185  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
OF852_03180  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
OF852_06935  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
OF852_00230  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
OF852_03315  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
OF852_02415  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
OF852_02560  sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase [KO:K00627] [EC:2.3.1.12]
OF852_02565  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
OF852_11115  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
OF852_06690  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
OF852_10395  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
OF852_07950  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
OF852_07235  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
OF852_09295  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
OF852_02470  ROK family protein [KO:K00886] [EC:2.7.1.63]
OF852_01395  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
hom00020  Citrate cycle (TCA cycle)
hom00030  Pentose phosphate pathway
hom00500  Starch and sucrose metabolism
hom00620  Pyruvate metabolism
hom00640  Propanoate metabolism
hom00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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