KEGG   PATHWAY: hom00230
Entry
hom00230                    Pathway                                
Name
Purine metabolism - Homoserinibacter sp. YIM 151385
Class
Metabolism; Nucleotide metabolism
Pathway map
hom00230  Purine metabolism
hom00230

Module
hom_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:hom00230]
hom_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:hom00230]
hom_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:hom00230]
hom_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:hom00230]
Other DBs
GO: 0006163 0042278
Organism
Homoserinibacter sp. YIM 151385 [GN:hom]
Gene
OF852_09295  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
OF852_00005  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
OF852_10725  purF; amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
OF852_10705  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
OF852_12660  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
OF852_10655  purL; phosphoribosylformylglycinamidine synthase subunit PurL [KO:K23269] [EC:6.3.5.3]
OF852_10680  purS; phosphoribosylformylglycinamidine synthase subunit PurS [KO:K23264] [EC:6.3.5.3]
OF852_10675  purQ; phosphoribosylformylglycinamidine synthase subunit PurQ [KO:K23265] [EC:6.3.5.3 3.5.1.2]
OF852_10740  purM; phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
OF852_07535  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
OF852_07530  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
OF852_10120  purB; adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
OF852_12665  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
OF852_00285  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
OF852_13325  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
OF852_10505  HAD-IIA family hydrolase [KO:K02566] [EC:3.1.3.5]
OF852_07625  purine-nucleoside phosphorylase [KO:K03783] [EC:2.4.2.1]
OF852_11595  hpt; hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
OF852_12530  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
OF852_12540  GuaB3 family IMP dehydrogenase-related protein [KO:K00088] [EC:1.1.1.205]
OF852_05265  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
OF852_00915  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
OF852_12575  guaA; glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
OF852_01190  GuaB1 family IMP dehydrogenase-related protein [KO:K26110] [EC:1.7.1.7]
OF852_03430  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
OF852_13745  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
OF852_13750  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
OF852_02250  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
OF852_03565  bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
OF852_10555  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
OF852_07645  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
OF852_12360  adenylate kinase [KO:K00939] [EC:2.7.4.3]
OF852_06220  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
OF852_03695  HIT domain-containing protein [KO:K19710] [EC:2.7.7.53]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
hom00030  Pentose phosphate pathway
hom00220  Arginine biosynthesis
hom00250  Alanine, aspartate and glutamate metabolism
hom00260  Glycine, serine and threonine metabolism
hom00340  Histidine metabolism
hom00630  Glyoxylate and dicarboxylate metabolism
hom00730  Thiamine metabolism
hom00740  Riboflavin metabolism
hom00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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