KEGG   PATHWAY: kvr00010
Entry
kvr00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Kocuria varians
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
kvr00010  Glycolysis / Gluconeogenesis
kvr00010

Module
kvr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:kvr00010]
kvr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:kvr00010]
kvr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:kvr00010]
kvr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:kvr00010]
Other DBs
GO: 0006096 0006094
Organism
Kocuria varians [GN:kvr]
Gene
CIB50_0001911  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
CIB50_0000112  pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
CIB50_0001348  glpX; Fructose-1,6-bisphosphatase class 2 [KO:K02446] [EC:3.1.3.11]
CIB50_0000507  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
CIB50_0001916  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
CIB50_0001113  gap2; Glyceraldehyde-3-phosphate dehydrogenase-like protein [KO:K00134] [EC:1.2.1.12]
CIB50_0001918  gapA; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
CIB50_0001917  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
CIB50_0001213  gpmA_2; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
CIB50_0001317  eno; Enolase [KO:K01689] [EC:4.2.1.11]
CIB50_0001947  pyk_2; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CIB50_0000362  pyk_1; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CIB50_0002093  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
CIB50_0001684  aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
CIB50_0001685  pdhD; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CIB50_0000187  ldh2; L-lactate dehydrogenase 2 [KO:K00016] [EC:1.1.1.27]
CIB50_0000432  adh; Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
CIB50_0001097  adhc1; NADP-dependent alcohol dehydrogenase C 1 [KO:K13979] [EC:1.1.1.2]
CIB50_0001401  thcA; EPTC-inducible aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
CIB50_0000238  acsA_1; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
CIB50_0000439  acsA_2; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
CIB50_0000518  acsA_3; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
CIB50_0000943  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
CIB50_0001133  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
CIB50_0002089  ppgK; Polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
CIB50_0000293  yeaD; Putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
CIB50_0000371  pckG; Phosphoenolpyruvate carboxykinase [GTP] [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
kvr00020  Citrate cycle (TCA cycle)
kvr00030  Pentose phosphate pathway
kvr00500  Starch and sucrose metabolism
kvr00620  Pyruvate metabolism
kvr00640  Propanoate metabolism
kvr00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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