KEGG   PATHWAY: metu00010
Entry
metu00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Methylococcus geothermalis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
metu00010  Glycolysis / Gluconeogenesis
metu00010

Module
metu_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:metu00010]
metu_M00002  Glycolysis, core module involving three-carbon compounds [PATH:metu00010]
metu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:metu00010]
Other DBs
GO: 0006096 0006094
Organism
Methylococcus geothermalis [GN:metu]
Gene
GNH96_11585  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
GNH96_09860  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GNH96_09880  diphosphate--fructose-6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
GNH96_02025  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
GNH96_02055  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
GNH96_06015  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
GNH96_00115  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
GNH96_07040  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GNH96_04250  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
GNH96_11665  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
GNH96_15580  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
GNH96_00110  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GNH96_03095  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
GNH96_01140  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
GNH96_01145  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
GNH96_01150  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GNH96_04325  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
GNH96_04355  zinc-binding alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
GNH96_08785  alcohol dehydrogenase catalytic domain-containing protein [KO:K13979] [EC:1.1.1.2]
GNH96_04380  PQQ-dependent dehydrogenase, methanol/ethanol family [KO:K14028] [EC:1.1.2.7]
GNH96_04395  methanol dehydrogenase [KO:K14029] [EC:1.1.2.7]
GNH96_14800  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
GNH96_06930  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
GNH96_15140  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
GNH96_00515  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
metu00020  Citrate cycle (TCA cycle)
metu00030  Pentose phosphate pathway
metu00500  Starch and sucrose metabolism
metu00620  Pyruvate metabolism
metu00640  Propanoate metabolism
metu00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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