KEGG   PATHWAY: mpah03050
Entry
mpah03050                   Pathway                                
Name
Proteasome - Mus pahari (shrew mouse)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
mpah03050  Proteasome
mpah03050

Other DBs
GO: 0000502
Organism
Mus pahari (shrew mouse) [GN:mpah]
Gene
110332775  Psmd3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
110312964  Psmd9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
110331343  Psmd12; 26S proteasome non-ATPase regulatory subunit 12 isoform X1 [KO:K03035]
110331208  Psmd11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
110325295  Psmd6; 26S proteasome non-ATPase regulatory subunit 6 isoform X1 [KO:K03037]
110337398  Psmd7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
110319108  Psmd13; 26S proteasome non-ATPase regulatory subunit 13 isoform X1 [KO:K03039]
110318110  Psmd14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
110323088  Psmd8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
110317098  Sem1; 26S proteasome complex subunit SEM1 [KO:K10881]
110329924  Psmd2; 26S proteasome non-ATPase regulatory subunit 2 isoform X1 [KO:K03028]
110321309  Psmd1; 26S proteasome non-ATPase regulatory subunit 1 isoform X1 [KO:K03032]
110318228  Adrm1; proteasomal ubiquitin receptor ADRM1 [KO:K06691]
110319004  proteasomal ubiquitin receptor ADRM1-like [KO:K06691]
110317419  Psmc2; 26S protease regulatory subunit 7 [KO:K03061]
110324155  Psmc1; 26S protease regulatory subunit 4 isoform X1 [KO:K03062]
110331458  Psmc5; 26S protease regulatory subunit 8 [KO:K03066]
110325226  Psmc6; 26S protease regulatory subunit 10B [KO:K03064]
110317665  Psmc3; 26S protease regulatory subunit 6A [KO:K03065]
110317526  Psmc4; 26S protease regulatory subunit 6B isoform X1 [KO:K03063]
110325252  Psme1; proteasome activator complex subunit 1 isoform X1 [KO:K06696]
110325415  Psme2; proteasome activator complex subunit 2 isoform X1 [KO:K06697]
110331216  Psme3; proteasome activator complex subunit 3 isoform X1 [KO:K06698]
110330686  Psme4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
110324196  Psma6; proteasome subunit alpha type-6 isoform X1 [KO:K02730] [EC:3.4.25.1]
110333899  Psma2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
110327417  Psma4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
110319566  Psma7; proteasome subunit alpha type-7 isoform X1 [KO:K02731] [EC:3.4.25.1]
110333269  Psma8; proteasome subunit alpha type-7-like isoform X1 [KO:K02731] [EC:3.4.25.1]
110320113  Psma5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
110321258  Psma1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
110324319  Psma3; proteasome subunit alpha type-3 isoform X1 [KO:K02727] [EC:3.4.25.1]
110331969  Psmb6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
110317854  Psmb7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
110332263  Psmb3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
110323478  Psmb2; proteasome subunit beta type-2 isoform X1 [KO:K02734] [EC:3.4.25.1]
110325463  Psmb5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
110338158  Psmb1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
110320096  Psmb4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
110335684  Psmb9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
110337585  Psmb10; proteasome subunit beta type-10 [KO:K02733] [EC:3.4.25.1]
110335701  Psmb8; proteasome subunit beta type-8 [KO:K02740] [EC:3.4.25.1]
110326021  Psmb11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
110326932  Ifng; interferon gamma [KO:K04687]
110318508  Psmf1; proteasome inhibitor PI31 subunit [KO:K06700]
110322031  LOW QUALITY PROTEIN: proteasome maturation protein-like [KO:K11599]
110339160  Pomp; proteasome maturation protein [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
mpah04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
LinkDB

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