KEGG   PATHWAY: msei00010
Entry
msei00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Mycolicibacterium sediminis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
msei00010  Glycolysis / Gluconeogenesis
msei00010

Module
msei_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msei00010]
msei_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msei00010]
msei_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:msei00010]
msei_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msei00010]
Other DBs
GO: 0006096 0006094
Organism
Mycolicibacterium sediminis [GN:msei]
Gene
MSEDJ_23330  glucokinase [KO:K25026] [EC:2.7.1.2]
MSEDJ_58500  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
MSEDJ_32940  pfkA; ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
MSEDJ_55060  glpX; fructose-1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
MSEDJ_06940  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
MSEDJ_10450  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
MSEDJ_10750  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
MSEDJ_18420  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
MSEDJ_37900  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
MSEDJ_37880  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
MSEDJ_37890  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
MSEDJ_20110  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
MSEDJ_57130  eno; enolase [KO:K01689] [EC:4.2.1.11]
MSEDJ_39170  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
MSEDJ_14060  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
MSEDJ_41050  pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
MSEDJ_47200  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
MSEDJ_46820  hypothetical protein [KO:K00627] [EC:2.3.1.12]
MSEDJ_19840  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MSEDJ_49000  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
MSEDJ_48990  orB; 2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
MSEDJ_01200  alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
MSEDJ_10660  alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
MSEDJ_28540  adhA; zinc-dependent alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
MSEDJ_52440  oxidoreductase [KO:K13953] [EC:1.1.1.1]
MSEDJ_04260  putative zinc-containing alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
MSEDJ_18400  alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
MSEDJ_32340  NADP-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
MSEDJ_32400  adhC2; NADP-dependent alcohol dehydrogenase C 2 [KO:K13979] [EC:1.1.1.2]
MSEDJ_01130  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MSEDJ_12400  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MSEDJ_13960  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MSEDJ_16030  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MSEDJ_22740  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MSEDJ_26840  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MSEDJ_34410  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MSEDJ_50350  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MSEDJ_24660  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
MSEDJ_59560  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
MSEDJ_03620  hypothetical protein [KO:K01895] [EC:6.2.1.1]
MSEDJ_05030  galM; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
MSEDJ_18150  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
MSEDJ_30280  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
MSEDJ_35870  polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
MSEDJ_15110  pckG; phosphoenolpyruvate carboxykinase [GTP] [KO:K01596] [EC:4.1.1.32]
MSEDJ_30090  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
msei00020  Citrate cycle (TCA cycle)
msei00030  Pentose phosphate pathway
msei00500  Starch and sucrose metabolism
msei00620  Pyruvate metabolism
msei00640  Propanoate metabolism
msei00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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