KEGG   PATHWAY: npd00970
Entry
npd00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Nothoprocta perdicaria (Chilean tinamou)
Class
Genetic Information Processing; Translation
Pathway map
npd00970  Aminoacyl-tRNA biosynthesis
npd00970

Organism
Nothoprocta perdicaria (Chilean tinamou) [GN:npd]
Gene
112943242  AARS; alanine--tRNA ligase, cytoplasmic [KO:K01872] [EC:6.1.1.7]
112943384  NARS2; probable asparagine--tRNA ligase, mitochondrial [KO:K01893] [EC:6.1.1.22]
112943631  LARS2; probable leucine--tRNA ligase, mitochondrial [KO:K01869] [EC:6.1.1.4]
112944293  RARS; arginine--tRNA ligase, cytoplasmic [KO:K01887] [EC:6.1.1.19]
112944313  [KO:K01892] [EC:6.1.1.21]
112944328  HARS; histidine--tRNA ligase, cytoplasmic isoform X1 [KO:K01892] [EC:6.1.1.21]
112944617  SARS; serine--tRNA ligase, cytoplasmic [KO:K01875] [EC:6.1.1.11]
112945124  QRSL1; glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial [KO:K02433] [EC:6.3.5.6 6.3.5.7]
112945138  CARS2; probable cysteine--tRNA ligase, mitochondrial [KO:K01883] [EC:6.1.1.16]
112945220  CARS; cysteine--tRNA ligase, cytoplasmic isoform X1 [KO:K01883] [EC:6.1.1.16]
112945776  GATC; glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial [KO:K02435] [EC:6.3.5.6 6.3.5.7]
112945939  SEPSECS; O-phosphoseryl-tRNA(Sec) selenium transferase isoform X1 [KO:K03341] [EC:2.9.1.2]
112946298  TARS; threonine--tRNA ligase, cytoplasmic [KO:K01868] [EC:6.1.1.3]
112946594  RARS2; probable arginine--tRNA ligase, mitochondrial [KO:K01887] [EC:6.1.1.19]
112946996  MARS2; methionine--tRNA ligase, mitochondrial isoform X1 [KO:K01874] [EC:6.1.1.10]
112947484  KARS; lysine--tRNA ligase isoform X1 [KO:K04567] [EC:6.1.1.6]
112947641  FARS2; phenylalanine--tRNA ligase, mitochondrial isoform X1 [KO:K01889] [EC:6.1.1.20]
112947817  PSTK; L-seryl-tRNA(Sec) kinase [KO:K10837] [EC:2.7.1.164]
112947894  FARSB; phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
112948149  YARS2; tyrosine--tRNA ligase, mitochondrial [KO:K01866] [EC:6.1.1.1]
112948323  MTFMT; methionyl-tRNA formyltransferase, mitochondrial [KO:K00604] [EC:2.1.2.9]
112948578  DARS; aspartate--tRNA ligase, cytoplasmic [KO:K22503] [EC:6.1.1.12]
112949250  GATB; glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial [KO:K02434] [EC:6.3.5.6 6.3.5.7]
112950046  NARS; asparagine--tRNA ligase, cytoplasmic [KO:K01893] [EC:6.1.1.22]
112950412  DARS2; aspartate--tRNA ligase, mitochondrial [KO:K01876] [EC:6.1.1.12]
112950626  TARS2; threonine--tRNA ligase, mitochondrial [KO:K01868] [EC:6.1.1.3]
112950942  YARS; tyrosine--tRNA ligase, cytoplasmic [KO:K01866] [EC:6.1.1.1]
112952850  LARS; leucine--tRNA ligase, cytoplasmic [KO:K01869] [EC:6.1.1.4]
112953019  IARS; isoleucine--tRNA ligase, cytoplasmic [KO:K01870] [EC:6.1.1.5]
112955111  EPRS; bifunctional glutamate/proline--tRNA ligase isoform X1 [KO:K14163] [EC:6.1.1.17 6.1.1.15]
112955121  IARS2; isoleucine--tRNA ligase, mitochondrial [KO:K01870] [EC:6.1.1.5]
112955510  FARSA; phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
112956937  WARS; tryptophan--tRNA ligase, cytoplasmic [KO:K01867] [EC:6.1.1.2]
112957546  AARS2; alanine--tRNA ligase, mitochondrial [KO:K01872] [EC:6.1.1.7]
112958089  GARS; glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
112958695  QARS; LOW QUALITY PROTEIN: glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
112958754  [KO:K01868] [EC:6.1.1.3]
112959778  EARS2; probable glutamate--tRNA ligase, mitochondrial [KO:K01885] [EC:6.1.1.17]
112960107  WARS2; tryptophan--tRNA ligase, mitochondrial [KO:K01867] [EC:6.1.1.2]
112960192  PARS2; probable proline--tRNA ligase, mitochondrial [KO:K01881] [EC:6.1.1.15]
62676470  trnG(ucc); tRNA-Gly [KO:K14225]
62676472  trnW(uca); tRNA-Trp [KO:K14235]
62676473  trnA(ugc); tRNA-Ala [KO:K14218]
62676475  trnE(uuc); tRNA-Glu [KO:K14224]
62676476  trnV(uac); tRNA-Val [KO:K14237]
62676477  trnL(uaa); tRNA-Leu [KO:K14228]
62676478  trnN(guu); tRNA-Asn [KO:K14220]
62676479  trnQ(uug); tRNA-Gln [KO:K14223]
62676480  trnR(ucg); tRNA-Arg [KO:K14219]
62676483  trnH(gug); tRNA-His [KO:K14226]
62676484  trnY(gua); tRNA-Tyr [KO:K14236]
62676486  trnC(gca); tRNA-Cys [KO:K14222]
62676489  trnT(ugu); tRNA-Thr [KO:K14234]
62676490  trnP(ugg); tRNA-Pro [KO:K14232]
62676492  trnS(gcu); tRNA-Ser [KO:K14233]
62676493  trnL(uag); tRNA-Leu [KO:K14228]
62676495  trnK(uuu); tRNA-Lys [KO:K14229]
62676498  trnI(gau); tRNA-Ile [KO:K14227]
62676499  trnM(cau); tRNA-Met [KO:K14230]
62676500  trnS(uga); tRNA-Ser [KO:K14233]
62676501  trnD(guc); tRNA-Asp [KO:K14221]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
npd00250  Alanine, aspartate and glutamate metabolism
npd00260  Glycine, serine and threonine metabolism
npd00270  Cysteine and methionine metabolism
npd00290  Valine, leucine and isoleucine biosynthesis
npd00330  Arginine and proline metabolism
npd00340  Histidine metabolism
npd00380  Tryptophan metabolism
npd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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