KEGG   PATHWAY: aaqi00630
Entry
aaqi00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Arcobacter aquimarinus
Class
Metabolism; Carbohydrate metabolism
Pathway map
aaqi00630  Glyoxylate and dicarboxylate metabolism
aaqi00630

Other DBs
GO: 0046487 0043648
Organism
Arcobacter aquimarinus [GN:aaqi]
Gene
AAQM_2071  acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) [KO:K01895] [EC:6.2.1.1]
AAQM_1187  mdh; malate dehydrogenase, NAD-dependent [KO:K00024] [EC:1.1.1.37]
AAQM_0379  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
AAQM_1647  acnB; aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AAQM_1651  fadI; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
AAQM_2072  enoyl-CoA hydratase [KO:K14449] [EC:4.2.1.148]
AAQM_1184  gmuE; coenzyme B12-dependent glutamate mutase GlmES, E (epsilon) subunit [KO:K19268] [EC:5.4.99.1]
AAQM_1185  gmuS; coenzyme B12-dependent glutamate mutase GlmES, S (sigma) subunit [KO:K01846] [EC:5.4.99.1]
AAQM_2056  glycolate oxidase, subunit GlcD-related protein [KO:K00104] [EC:1.1.99.14]
AAQM_1468  anaerobic glycerol-3-phosphate dehydrogenase [KO:K11473] [EC:1.1.99.14]
AAQM_2486  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AAQM_0157  HAD superfamily hydrolase, probable phosphatase [KO:K01091] [EC:3.1.3.18]
AAQM_1353  phosphoglycolate phosphatase-like HAD superfamily hydrolase [KO:K01091] [EC:3.1.3.18]
AAQM_2166  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AAQM_1768  glyA1; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AAQM_1680  glyA2; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AAQM_1684  glyA3; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AAQM_1708  fdhN; formate dehydrogenase N, alpha subunit, selenocysteine-containing [KO:K00123] [EC:1.17.1.9]
AAQM_1707  fdhGIII; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit [KO:K00124]
AAQM_1706  fdhO; formate dehydrogenase N, cytochrome b-556 subunit [KO:K00127]
AAQM_1320  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
aaqi00010  Glycolysis / Gluconeogenesis
aaqi00020  Citrate cycle (TCA cycle)
aaqi00030  Pentose phosphate pathway
aaqi00071  Fatty acid degradation
aaqi00230  Purine metabolism
aaqi00250  Alanine, aspartate and glutamate metabolism
aaqi00260  Glycine, serine and threonine metabolism
aaqi00620  Pyruvate metabolism
aaqi00710  Carbon fixation by Calvin cycle
aaqi00750  Vitamin B6 metabolism
aaqi00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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