KEGG   PATHWAY: aei00020
Entry
aei00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Acinetobacter equi
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
aei00020  Citrate cycle (TCA cycle)
aei00020

Module
aei_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:aei00020]
aei_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:aei00020]
aei_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:aei00020]
aei_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:aei00020]
aei_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:aei00020]
Other DBs
GO: 0006099
Organism
Acinetobacter equi [GN:aei]
Gene
AOY20_00595  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
AOY20_12810  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AOY20_13515  isocitrate dehydrogenase [KO:K00031] [EC:1.1.1.42]
AOY20_00570  2-oxoglutarate dehydrogenase [KO:K00164] [EC:1.2.4.2]
AOY20_00565  dihydrolipoamide succinyltransferase [KO:K00658] [EC:2.3.1.61]
AOY20_00560  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AOY20_00550  succinyl-CoA synthetase subunit alpha [KO:K01902] [EC:6.2.1.5]
AOY20_00555  sucC; succinyl-CoA synthetase subunit beta [KO:K01903] [EC:6.2.1.5]
AOY20_05125  acetyl-CoA hydrolase [KO:K18118] [EC:2.8.3.18]
AOY20_00580  fumarate reductase [KO:K00239] [EC:1.3.5.1]
AOY20_00575  sdhB; succinate dehydrogenase [KO:K00240] [EC:1.3.5.1]
AOY20_00590  succinate dehydrogenase [KO:K00241]
AOY20_00585  succinate dehydrogenase [KO:K00242]
AOY20_01730  fumarate hydratase [KO:K01676] [EC:4.2.1.2]
AOY20_11730  fumarate hydratase [KO:K01679] [EC:4.2.1.2]
AOY20_06050  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AOY20_10745  malate:quinone oxidoreductase [KO:K00116] [EC:1.1.5.4]
AOY20_00150  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
AOY20_04780  aceE; pyruvate dehydrogenase [KO:K00163] [EC:1.2.4.1]
AOY20_04785  dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
aei00010  Glycolysis / Gluconeogenesis
aei00061  Fatty acid biosynthesis
aei00071  Fatty acid degradation
aei00190  Oxidative phosphorylation
aei00220  Arginine biosynthesis
aei00250  Alanine, aspartate and glutamate metabolism
aei00280  Valine, leucine and isoleucine degradation
aei00350  Tyrosine metabolism
aei00470  D-Amino acid metabolism
aei00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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