KEGG   PATHWAY: aes03430
Entry
aes03430                    Pathway                                
Name
Mismatch repair - Aeromonas sp. ASNIH5
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
aes03430  Mismatch repair
aes03430

Other DBs
GO: 0006298
Organism
Aeromonas sp. ASNIH5 [GN:aes]
Gene
C2U30_17135  mutS; DNA mismatch repair protein MutS [KO:K03555]
C2U30_19065  DNA mismatch repair endonuclease MutL [KO:K03572]
C2U30_17740  DNA mismatch repair endonuclease MutH [KO:K03573]
C2U30_15385  DNA helicase II [KO:K03657] [EC:5.6.2.4]
C2U30_04560  exodeoxyribonuclease I [KO:K01141] [EC:3.1.11.1]
C2U30_04085  exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
C2U30_08500  exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
C2U30_08320  single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
C2U30_09140  single-stranded DNA-binding protein [KO:K03111]
C2U30_12090  single-stranded DNA-binding protein [KO:K03111]
C2U30_19215  single-stranded DNA-binding protein [KO:K03111]
C2U30_20570  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
C2U30_13945  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
C2U30_03125  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
C2U30_08225  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
C2U30_02920  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
C2U30_03885  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
C2U30_18270  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
C2U30_06200  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
C2U30_17225  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
C2U30_18585  hypothetical protein [KO:K02344] [EC:2.7.7.7]
C2U30_20735  ligA; DNA ligase [KO:K01972] [EC:6.5.1.2]
C2U30_07895  DNA adenine methylase [KO:K06223] [EC:2.1.1.72]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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