KEGG   PATHWAY: afz00970
Entry
afz00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Antechinus flavipes (yellow-footed antechinus)
Class
Genetic Information Processing; Translation
Pathway map
afz00970  Aminoacyl-tRNA biosynthesis
afz00970

Organism
Antechinus flavipes (yellow-footed antechinus) [GN:afz]
Gene
65342054  KQ508_mgt07; tRNA-Ala [KO:K14218]
127540179  probable glutamate--tRNA ligase, mitochondrial isoform X1 [KO:K01885] [EC:6.1.1.17]
127562505  bifunctional glutamate/proline--tRNA ligase isoform X1 [KO:K14163] [EC:6.1.1.17 6.1.1.15]
127562045  glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial isoform X1 [KO:K02433] [EC:6.3.5.6 6.3.5.7]
127540277  glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial isoform X1 [KO:K02434] [EC:6.3.5.6 6.3.5.7]
127543339  glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial [KO:K02435] [EC:6.3.5.6 6.3.5.7]
127541464  LOW QUALITY PROTEIN: glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
127547669  alanine--tRNA ligase, cytoplasmic [KO:K01872] [EC:6.1.1.7]
127561801  alanine--tRNA ligase, mitochondrial isoform X1 [KO:K01872] [EC:6.1.1.7]
127554362  aspartate--tRNA ligase, cytoplasmic [KO:K22503] [EC:6.1.1.12]
127562883  aspartate--tRNA ligase, mitochondrial [KO:K01876] [EC:6.1.1.12]
127543472  asparagine--tRNA ligase, cytoplasmic isoform X1 [KO:K01893] [EC:6.1.1.22]
127546751  asparagine--tRNA ligase, cytoplasmic-like [KO:K01893] [EC:6.1.1.22]
127555126  probable asparagine--tRNA ligase, mitochondrial isoform X1 [KO:K01893] [EC:6.1.1.22]
127549648  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
127543437  threonine--tRNA ligase 1, cytoplasmic [KO:K01868] [EC:6.1.1.3]
127551326  threonine--tRNA ligase 2, cytoplasmic isoform X1 [KO:K01868] [EC:6.1.1.3]
127559100  threonine--tRNA ligase, mitochondrial isoform X1 [KO:K01868] [EC:6.1.1.3]
127556144  serine--tRNA ligase, mitochondrial [KO:K01875] [EC:6.1.1.11]
127559396  serine--tRNA ligase, cytoplasmic [KO:K01875] [EC:6.1.1.11]
127551668  L-seryl-tRNA(Sec) kinase isoform X1 [KO:K10837] [EC:2.7.1.164]
127539703  O-phosphoseryl-tRNA(Sec) selenium transferase isoform X1 [KO:K03341] [EC:2.9.1.2]
127553472  probable cysteine--tRNA ligase, mitochondrial isoform X1 [KO:K01883] [EC:6.1.1.16]
127540983  cysteine--tRNA ligase, cytoplasmic isoform X1 [KO:K01883] [EC:6.1.1.16]
127538070  methionine--tRNA ligase, cytoplasmic isoform X1 [KO:K01874] [EC:6.1.1.10]
127554430  methionine--tRNA ligase, mitochondrial [KO:K01874] [EC:6.1.1.10]
127551260  methionyl-tRNA formyltransferase, mitochondrial isoform X1 [KO:K00604] [EC:2.1.2.9]
127561036  valine--tRNA ligase, mitochondrial isoform X1 [KO:K01873] [EC:6.1.1.9]
127561073  valine--tRNA ligase isoform X1 [KO:K01873] [EC:6.1.1.9]
127550063  leucine--tRNA ligase, cytoplasmic isoform X1 [KO:K01869] [EC:6.1.1.4]
127537803  leucine--tRNA ligase, mitochondrial [KO:K01869] [EC:6.1.1.4]
127562501  isoleucine--tRNA ligase, mitochondrial [KO:K01870] [EC:6.1.1.5]
127549531  isoleucine--tRNA ligase, cytoplasmic [KO:K01870] [EC:6.1.1.5]
127547694  lysine--tRNA ligase-like [KO:K04567] [EC:6.1.1.6]
127547695  lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
127550175  arginine--tRNA ligase, cytoplasmic isoform X1 [KO:K01887] [EC:6.1.1.19]
127561982  probable arginine--tRNA ligase, mitochondrial isoform X1 [KO:K01887] [EC:6.1.1.19]
127563274  probable proline--tRNA ligase, mitochondrial [KO:K01881] [EC:6.1.1.15]
127550007  histidine--tRNA ligase, mitochondrial-like [KO:K01892] [EC:6.1.1.21]
127550008  histidine--tRNA ligase, cytoplasmic [KO:K01892] [EC:6.1.1.21]
127544210  phenylalanine--tRNA ligase, mitochondrial [KO:K01889] [EC:6.1.1.20]
127544803  phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
127553053  phenylalanine--tRNA ligase beta subunit [KO:K01890] [EC:6.1.1.20]
127555521  tyrosine--tRNA ligase, cytoplasmic [KO:K01866] [EC:6.1.1.1]
127538932  tyrosine--tRNA ligase, mitochondrial [KO:K01866] [EC:6.1.1.1]
127549906  tryptophan--tRNA ligase, cytoplasmic [KO:K01867] [EC:6.1.1.2]
127559204  tryptophan--tRNA ligase, mitochondrial [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
afz00250  Alanine, aspartate and glutamate metabolism
afz00260  Glycine, serine and threonine metabolism
afz00270  Cysteine and methionine metabolism
afz00290  Valine, leucine and isoleucine biosynthesis
afz00330  Arginine and proline metabolism
afz00340  Histidine metabolism
afz00380  Tryptophan metabolism
afz00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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