KEGG   PATHWAY: atb03440
Entry
atb03440                    Pathway                                
Name
Homologous recombination - Atopobium sp. oral taxon 416
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
atb03440  Homologous recombination
atb03440

Other DBs
GO: 0000724
Organism
Atopobium sp. oral taxon 416 [GN:atb]
Gene
J4859_08075  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
J4859_00410  ssb; single-stranded DNA-binding protein [KO:K03111]
J4859_00065  recF; DNA replication and repair protein RecF [KO:K03629]
J4859_08590  recO; DNA repair protein RecO [KO:K03584]
J4859_00525  recR; recombination protein RecR [KO:K06187]
J4859_08635  recA; recombinase RecA [KO:K03553]
J4859_11965  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
J4859_06455  ruvA; Holliday junction branch migration protein RuvA [KO:K03550]
J4859_06460  ruvB; Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
J4859_06450  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
J4859_01640  putative DNA binding domain-containing protein [KO:K03655] [EC:5.6.2.4]
J4859_01665  putative DNA binding domain-containing protein [KO:K03655] [EC:5.6.2.4]
J4859_02575  AAA family ATPase [KO:K03655] [EC:5.6.2.4]
J4859_07420  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
J4859_13970  putative DNA binding domain-containing protein [KO:K03655] [EC:5.6.2.4]
J4859_06435  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
J4859_00070  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
J4859_00515  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
J4859_08530  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
J4859_03150  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
J4859_07340  priA; primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

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