KEGG   PATHWAY: bim04146
Entry
bim04146                    Pathway                                
Name
Peroxisome - Bombus impatiens (common eastern bumble bee)
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
bim04146  Peroxisome
bim04146

Other DBs
GO: 0005777
Organism
Bombus impatiens (common eastern bumble bee) [GN:bim]
Gene
100748367  peroxisomal membrane protein PEX16 [KO:K13335]
100740931  peroxisomal biogenesis factor 3 [KO:K13336]
100741437  peroxisomal biogenesis factor 19 [KO:K13337]
100742596  ATP-binding cassette sub-family D member 3 [KO:K05677] [EC:7.6.2.4]
100745266  peroxisome biogenesis factor 1 isoform X1 [KO:K13338]
100750047  peroxisome assembly factor 2 isoform X1 [KO:K13339]
100748271  peroxisomal targeting signal 1 receptor [KO:K13342]
100748957  peroxisomal membrane protein PEX14 [KO:K13343]
100740215  peroxisomal membrane protein PEX13 [KO:K13344]
100748695  peroxisome assembly protein 12 isoform X2 [KO:K13345]
100746964  peroxisome biogenesis factor 10 [KO:K13346]
100744049  peroxisome biogenesis factor 2 [KO:K06664]
100741820  peroxisomal membrane protein 2 [KO:K13347]
100745530  protein Mpv17 [KO:K13348]
100741910  mpv17-like protein [KO:K13348]
100748336  mpv17-like protein 2 [KO:K13348]
100747417  mpv17-like protein 2 [KO:K13348]
100746028  PXMP2/4 family protein 4 isoform X1 [KO:K13349]
100741928  peroxisomal membrane protein 11B [KO:K13352]
100742640  peroxisomal membrane protein 11C [KO:K13353]
100747042  peroxisomal membrane protein PMP34 isoform X1 [KO:K13354]
100744016  2-hydroxyacyl-CoA lyase 1 isoform X1 [KO:K12261] [EC:4.1.2.63]
100748039  alpha-methylacyl-CoA racemase isoform X1 [KO:K01796] [EC:5.1.99.4]
112211981  alpha-methylacyl-CoA racemase-like [KO:K01796] [EC:5.1.99.4]
100749150  phytanoyl-CoA dioxygenase domain-containing protein 1 homolog [KO:K00477] [EC:1.14.11.18]
100742496  peroxisomal acyl-coenzyme A oxidase 3-like [KO:K00232] [EC:1.3.3.6]
100747467  probable peroxisomal acyl-coenzyme A oxidase 1 isoform X1 [KO:K00232] [EC:1.3.3.6]
100741041  probable peroxisomal acyl-coenzyme A oxidase 1 [KO:K00232] [EC:1.3.3.6]
100745646  peroxisomal multifunctional enzyme type 2 [KO:K12405] [EC:1.1.1.- 4.2.1.107 4.2.1.119]
100748275  non-specific lipid-transfer protein [KO:K08764] [EC:2.3.1.176]
100743223  delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [KO:K12663] [EC:5.3.3.21]
100740709  ATP-binding cassette sub-family D member 1 [KO:K05676] [EC:7.6.2.4]
100745273  long-chain-fatty-acid--CoA ligase 1 [KO:K01897] [EC:6.2.1.3]
100749999  long-chain-fatty-acid--CoA ligase 4 isoform X1 [KO:K01897] [EC:6.2.1.3]
100743787  enoyl-CoA delta isomerase 2, mitochondrial isoform X1 [KO:K13239] [EC:5.3.3.8]
100748147  nucleoside diphosphate-linked moiety X motif 19-like isoform X1 [KO:K13355] [EC:3.6.1.77]
105680488  malonyl-CoA decarboxylase, mitochondrial isoform X1 [KO:K01578] [EC:4.1.1.9]
100745376  dihydroxyacetone phosphate acyltransferase [KO:K00649] [EC:2.3.1.42]
100749573  alkyldihydroxyacetonephosphate synthase [KO:K00803] [EC:2.5.1.26]
100748394  putative fatty acyl-CoA reductase CG5065 [KO:K13356] [EC:1.2.1.84]
100745917  fatty acyl-CoA reductase wat [KO:K13356] [EC:1.2.1.84]
100746398  putative fatty acyl-CoA reductase CG5065 isoform X3 [KO:K13356] [EC:1.2.1.84]
100740430  fatty acyl-CoA reductase 1 isoform X1 [KO:K13356] [EC:1.2.1.84]
100741032  fatty acyl-CoA reductase wat [KO:K13356] [EC:1.2.1.84]
100749608  fatty acyl-CoA reductase 1 [KO:K13356] [EC:1.2.1.84]
112214120  putative fatty acyl-CoA reductase CG5065 [KO:K13356] [EC:1.2.1.84]
100744570  putative fatty acyl-CoA reductase CG5065 isoform X1 [KO:K13356] [EC:1.2.1.84]
100749349  putative fatty acyl-CoA reductase CG5065 [KO:K13356] [EC:1.2.1.84]
100745716  putative fatty acyl-CoA reductase CG5065 [KO:K13356] [EC:1.2.1.84]
100748630  putative fatty acyl-CoA reductase CG5065 isoform X1 [KO:K13356] [EC:1.2.1.84]
100740585  putative fatty acyl-CoA reductase CG5065 [KO:K13356] [EC:1.2.1.84]
100747705  fatty acyl-CoA reductase 1-like [KO:K13356] [EC:1.2.1.84]
100742805  putative fatty acyl-CoA reductase CG5065 [KO:K13356] [EC:1.2.1.84]
100749776  fatty acyl-CoA reductase 1-like [KO:K13356] [EC:1.2.1.84]
100750082  putative fatty acyl-CoA reductase CG5065 isoform X1 [KO:K13356] [EC:1.2.1.84]
100742685  putative fatty acyl-CoA reductase CG8306 isoform X1 [KO:K13356] [EC:1.2.1.84]
100746762  putative fatty acyl-CoA reductase CG5065 isoform X1 [KO:K13356] [EC:1.2.1.84]
100750141  putative fatty acyl-CoA reductase CG5065 isoform X3 [KO:K13356] [EC:1.2.1.84]
100744094  mevalonate kinase [KO:K00869] [EC:2.7.1.36]
100743984  phosphomevalonate kinase [KO:K13273] [EC:2.7.4.2]
100742439  serine--pyruvate aminotransferase, mitochondrial [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
105681513  D-aspartate oxidase [KO:K00273] [EC:1.4.3.3]
100748337  D-aspartate oxidase [KO:K00272] [EC:1.4.3.1]
100748810  isocitrate dehydrogenase [NADP] cytoplasmic isoform X1 [KO:K00031] [EC:1.1.1.42]
100741047  hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X2 [KO:K01640] [EC:4.1.3.4]
100744728  hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
100744315  catalase isoform X1 [KO:K03781] [EC:1.11.1.6]
100744119  peroxiredoxin-5, mitochondrial [KO:K11187] [EC:1.11.1.24]
105680241  peroxiredoxin-5, mitochondrial-like [KO:K11187] [EC:1.11.1.24]
100744846  superoxide dismutase [Cu-Zn], chloroplastic [KO:K04565] [EC:1.15.1.1]
100741261  superoxide dismutase [Cu-Zn] [KO:K04565] [EC:1.15.1.1]
100748913  superoxide dismutase [Mn], mitochondrial [KO:K04564] [EC:1.15.1.1]
100747832  peroxiredoxin 1 [KO:K13279] [EC:1.11.1.24]
112213460  peroxiredoxin-2-like [KO:K13279] [EC:1.11.1.24]
100745073  xanthine dehydrogenase isoform X3 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
100741462  xanthine dehydrogenase/oxidase isoform X1 [KO:K00106] [EC:1.17.1.4 1.17.3.2]
100749244  dehydrogenase/reductase SDR family member 4 [KO:K11147] [EC:1.1.-.-]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
bim00071  Fatty acid degradation
bim00230  Purine metabolism
bim00564  Glycerophospholipid metabolism
bim00565  Ether lipid metabolism
bim00830  Retinol metabolism
bim00900  Terpenoid backbone biosynthesis
KO pathway
ko04146   
LinkDB

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