KEGG   PATHWAY: bjp00010
Entry
bjp00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Bradyrhizobium japonicum E109
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
bjp00010  Glycolysis / Gluconeogenesis
bjp00010

Module
bjp_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bjp00010]
bjp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:bjp00010]
bjp_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bjp00010]
bjp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bjp00010]
Other DBs
GO: 0006096 0006094
Organism
Bradyrhizobium japonicum E109 [GN:bjp]
Gene
RN69_25025  glucokinase [KO:K00845] [EC:2.7.1.2]
RN69_12975  transaldolase [KO:K13810] [EC:2.2.1.2 5.3.1.9]
RN69_33560  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
RN69_35040  fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
RN69_26400  glpX; fructose 1,6-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
RN69_40200  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
RN69_35025  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
RN69_40195  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
RN69_33555  fructose 1,6-bisphosphatase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
RN69_23895  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
RN69_40185  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
RN69_40190  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
RN69_03230  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
RN69_23990  eno; enolase [KO:K01689] [EC:4.2.1.11]
RN69_11145  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
RN69_35315  pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
RN69_33710  transketolase [KO:K00163] [EC:1.2.4.1]
RN69_24030  pyruvate dehydrogenase [KO:K00161] [EC:1.2.4.1]
RN69_24035  pyruvate dehydrogenase [KO:K00162] [EC:1.2.4.1]
RN69_24050  branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
RN69_24060  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
RN69_02025  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
RN69_13055  ferredoxin oxidoreductase [KO:K00174] [EC:1.2.7.3 1.2.7.11]
RN69_13050  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
RN69_16910  alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
RN69_41460  alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
RN69_33905  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
RN69_19795  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
RN69_27680  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
RN69_16885  alcohol dehydrogenase [KO:K00114] [EC:1.1.2.8]
RN69_16955  quinonprotein alcohol dehydrogenase [KO:K00114] [EC:1.1.2.8]
RN69_08340  betaine-aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
RN69_29485  betaine-aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
RN69_19165  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
RN69_33705  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
RN69_24020  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
RN69_02660  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
RN69_28485  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
RN69_09560  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
RN69_06050  6-carboxyhexanoate--CoA ligase [KO:K24012] [EC:6.2.1.13]
RN69_31730  aldose epimerase [KO:K01785] [EC:5.1.3.3]
RN69_07195  hydrolase [KO:K20866] [EC:3.1.3.10]
RN69_23830  haloacid dehalogenase [KO:K20866] [EC:3.1.3.10]
RN69_36115  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
RN69_05815  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
RN69_42130  phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
bjp00020  Citrate cycle (TCA cycle)
bjp00030  Pentose phosphate pathway
bjp00500  Starch and sucrose metabolism
bjp00620  Pyruvate metabolism
bjp00640  Propanoate metabolism
bjp00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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