KEGG   PATHWAY: bmh00240
Entry
bmh00240                    Pathway                                
Name
Pyrimidine metabolism - Bacillus megaterium WSH-002
Class
Metabolism; Nucleotide metabolism
Pathway map
bmh00240  Pyrimidine metabolism
bmh00240

Module
bmh_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bmh00240]
bmh_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bmh00240]
Other DBs
GO: 0006220 0006213
Organism
Bacillus megaterium WSH-002 [GN:bmh]
Gene
BMWSH_0976  Carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
BMWSH_4574  carB; Carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
BMWSH_0975  pyrAA; Carbamoyl-phosphate synthase, small subunit [KO:K01956] [EC:6.3.5.5]
BMWSH_4575  carA; Carbamoylphosphate synthetase light subunit [KO:K01956] [EC:6.3.5.5]
BMWSH_0973  pyrB; Aspartate carbamoyltransferase catalytic chain-like protein [KO:K00609] [EC:2.1.3.2]
BMWSH_0974  pyrC; Dihydroorotase, multifunctional complex type [KO:K01465] [EC:3.5.2.3]
BMWSH_0978  pyrD; Dihydroorotate dehydrogenase family protein [KO:K17828] [EC:1.3.1.14]
BMWSH_0977  pyrK; Dihydroorotate dehydrogenase electron transfer subunit [KO:K02823]
BMWSH_0980  pyrE; Orotate phosphoribosyltransferase PyrE [KO:K00762] [EC:2.4.2.10]
BMWSH_0979  pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
BMWSH_1064  pyrH; Uridine monophospho kinase [KO:K09903] [EC:2.7.4.22]
BMWSH_0905  ndk; Nucleoside diphosphate kinase 3 [KO:K00940] [EC:2.7.4.6]
BMWSH_0580  maf; Maf-like protein [KO:K06287] [EC:3.6.1.-]
BMWSH_0103  pyrG; CTP synthase (UTP-ammonia lyase) [KO:K01937] [EC:6.3.4.2]
BMWSH_0886  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
BMWSH_0643  udk; Uridine kinase [KO:K00876] [EC:2.7.1.48]
BMWSH_1233  Putative 5'(3')-deoxyribonucleotidase [KO:K01081] [EC:3.1.3.5]
BMWSH_2510  yfkN; 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic protein [KO:K08693] [EC:3.1.4.16 3.1.3.6 3.1.3.5]
BMWSH_0119  upp; Uracil phosphoribosyltransferase/ribose 5-phosphate isomerase B [KO:K00761] [EC:2.4.2.9]
BMWSH_0971  pyrR; Uracil phosphoribosyltransferase 1 [KO:K02825] [EC:2.4.2.9]
BMWSH_1109  ymdB; Phosphoesterase family protein [KO:K09769] [EC:3.1.4.16]
BMWSH_2414  pyn2; Pyrimidine-nucleoside phosphorylase (PYNP) [KO:K00756] [EC:2.4.2.2]
BMWSH_0691  Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
BMWSH_2416  cdd; Cytidine deaminase Cdd [KO:K01489] [EC:3.5.4.5]
BMWSH_4259  Amidohydrolase 3 [KO:K01485] [EC:3.5.4.1 3.5.4.21]
BMWSH_1563  dcd; Deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
BMWSH_0755  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
BMWSH_0756  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
BMWSH_0360  nrdE; Ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
BMWSH_0757  nrdA; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependen t [KO:K00525] [EC:1.17.4.1]
BMWSH_0361  nrdF; Ribonucleoside-diphosphate reductase beta subunit [KO:K00526] [EC:1.17.4.1]
BMWSH_4969  dck; Deoxynucleoside kinase family protein [KO:K15519] [EC:2.7.1.76 2.7.1.74]
BMWSH_0664  comEB; ComEB protein [KO:K01493] [EC:3.5.4.12]
BMWSH_5179  tmk; Glutamine amidotransferase of anthranilate synthase [KO:K00943] [EC:2.7.4.9]
BMWSH_0111  tdk; Thymidine kinase [KO:K00857] [EC:2.7.1.21]
BMWSH_1165  thyA; Thymidylate synthase 2 [KO:K00560] [EC:2.1.1.45]
BMWSH_0810  gltB; Glutamate synthase small subunit [KO:K17722] [EC:1.3.1.1]
BMWSH_2560  Amidase, hydantoinase/carbamoylase family [KO:K06016] [EC:3.5.1.6 3.5.1.87]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
bmh00030  Pentose phosphate pathway
bmh00220  Arginine biosynthesis
bmh00250  Alanine, aspartate and glutamate metabolism
bmh00280  Valine, leucine and isoleucine degradation
bmh00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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