KEGG   PATHWAY: bspl03250
Entry
bspl03250                   Pathway                                
Name
Viral life cycle - HIV-1 - Betta splendens (Siamese fighting fish)
Class
Genetic Information Processing; Information processing in viruses
Pathway map
bspl03250  Viral life cycle - HIV-1
bspl03250

Organism
Betta splendens (Siamese fighting fish) [GN:bspl]
Gene
114842797  C-C chemokine receptor type 1-like [KO:K04180]
114845178  C-X-C chemokine receptor type 4-like [KO:K04189]
114847654  cxcr4b; C-X-C chemokine receptor type 4b [KO:K04189]
114850817  C-X-C chemokine receptor type 4-like [KO:K04189]
114842934  cd4-1; CD4-1 molecule isoform X1 [KO:K06454]
114852774  map1aa; microtubule-associated protein 1A [KO:K10429]
114853095  map1sa; microtubule-associated protein 1S isoform X1 [KO:K10429]
114866761  map1b; microtubule-associated protein 1B [KO:K10429]
114848611  microtubule-associated protein 1S-like [KO:K10429]
114857024  map1ab; microtubule-associated protein 1A isoform X1 [KO:K10429]
114869736  fez1; fasciculation and elongation protein zeta-1 [KO:K25663]
114858216  zgc:162200; protein bicaudal D homolog 2 [KO:K18739]
114858272  zgc:171572; protein bicaudal D homolog 2 isoform X1 [KO:K18739]
114861298  protein bicaudal D homolog 1-like isoform X1 [KO:K18739]
114854988  protein bicaudal D homolog 2 [KO:K18739]
114857508  bicd1a; protein bicaudal D homolog 1 isoform X1 [KO:K18739]
114858679  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
114859012  samhd1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [KO:K22544] [EC:3.1.5.-]
114859373  deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [KO:K22544] [EC:3.1.5.-]
114859126  psip1a; PC4 and SFRS1 interacting protein 1a isoform X1 [KO:K25057]
114860374  pin1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [KO:K09578] [EC:5.2.1.8]
114866972  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like [KO:K11648]
114862996  smarcb1a; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A [KO:K11648]
114866627  ppiab; peptidylprolyl isomerase Ab (cyclophilin A) [KO:K03767] [EC:5.2.1.8]
114862034  ppiaa; peptidyl-prolyl cis-trans isomerase A [KO:K03767] [EC:5.2.1.8]
114852533  cleavage and polyadenylation specificity factor subunit 7-like [KO:K14398]
114862105  cpsf6; cleavage and polyadenylation specificity factor subunit 6 isoform X1 [KO:K14398]
114862378  tnpo3; transportin-3 [KO:K15436]
114855136  interferon-induced GTP-binding protein Mx3-like [KO:K14754]
114855722  interferon-induced GTP-binding protein Mx-like isoform X1 [KO:K14754]
114855724  interferon-induced GTP-binding protein Mx-like isoform X2 [KO:K14754]
114856098  interferon-induced GTP-binding protein Mx3-like [KO:K14754]
114846828  ranbp2; ranBP2-like and GRIP domain-containing protein 3 isoform X1 [KO:K12172] [EC:2.3.2.-]
114865510  nup153; nuclear pore complex protein Nup153 isoform X1 [KO:K14296]
114846151  ep300a; histone acetyltransferase p300 isoform X1 [KO:K04498] [EC:2.3.1.48]
114860119  ep300b; histone acetyltransferase p300 isoform X1 [KO:K04498] [EC:2.3.1.48]
114861050  crebbpb; CREB binding protein b isoform X1 [KO:K04498] [EC:2.3.1.48]
114851074  crebbpa; CREB-binding protein isoform X1 [KO:K04498] [EC:2.3.1.48]
114865388  kat2b; histone acetyltransferase KAT2B isoform X1 [KO:K06062] [EC:2.3.1.48]
114860768  kat2a; histone acetyltransferase KAT2A [KO:K06062] [EC:2.3.1.48]
114867315  cdk9; cyclin-dependent kinase 9 [KO:K02211] [EC:2.7.11.22 2.7.11.23]
114859079  ccnt1; cyclin-T1 [KO:K15188]
114846798  ccnt2a; cyclin-T2a isoform X1 [KO:K15188]
114848624  cyclin-T2-like isoform X1 [KO:K15188]
114869098  aff4; AF4/FMR2 family member 4 isoform X1 [KO:K15185]
114857937  RNA polymerase II elongation factor ELL [KO:K15183]
114852631  RNA polymerase II elongation factor ELL-like [KO:K15183]
114853464  ell; RNA polymerase II elongation factor ELL [KO:K15183]
114848126  RNA polymerase II elongation factor ELL-like isoform X1 [KO:K15183]
114855616  ell2; RNA polymerase II elongation factor ELL2 [KO:K15183]
114853543  mllt1a; protein ENL isoform X1 [KO:K15187]
114847311  mllt3; protein AF-9 isoform X1 [KO:K15187]
114844007  nelfa; negative elongation factor A [KO:K15179]
114846110  nelfb; negative elongation factor B [KO:K15180]
114856030  nelfcd; negative elongation factor C/D [KO:K15181]
114865963  nelfe; negative elongation factor E [KO:K15182]
114868951  supt4h1; transcription elongation factor SPT4 [KO:K15171]
114867680  supt5h; transcription elongation factor SPT5 [KO:K15172]
114862922  xpo1a; exportin-1 [KO:K14290]
114870474  xpo1b; exportin-1 isoform X1 [KO:K14290]
114864312  ran; GTP-binding nuclear protein Ran [KO:K07936]
114852747  furina; furin (paired basic amino acid cleaving enzyme) a [KO:K01349] [EC:3.4.21.75]
114857048  furinb; furin (paired basic amino acid cleaving enzyme) b isoform X1 [KO:K01349] [EC:3.4.21.75]
114855167  si:ch73-267c23.10; serine incorporator 3 isoform X1 [KO:K25661]
114862640  serinc5; serine incorporator 5 [KO:K25655]
114860726  hgs; hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1 [KO:K12182]
114857292  tsg101a; tumor susceptibility 101a [KO:K12183]
114845871  chmp6b; charged multivesicular body protein 6 [KO:K12195]
114859792  charged multivesicular body protein 6-like isoform X1 [KO:K12195]
114857718  charged multivesicular body protein 4b-like [KO:K12194]
114858940  charged multivesicular body protein 4b [KO:K12194]
114855998  chmp4ba; charged multivesicular body protein 4b [KO:K12194]
114865507  pdcd6ip; programmed cell death 6-interacting protein isoform X1 [KO:K12200]
114844267  vps4b; vacuolar protein sorting-associated protein 4B isoform X1 [KO:K12196]
114853258  vacuolar protein sorting-associated protein 4B-like [KO:K12196]
114857124  vps4a; vacuolar protein sorting-associated protein 4A isoform X1 [KO:K12196]
Reference
PMID:27357278
  Authors
Li G, De Clercq E
  Title
HIV Genome-Wide Protein Associations: a Review of 30 Years of Research.
  Journal
Microbiol Mol Biol Rev 80:679-731 (2016)
DOI:10.1128/MMBR.00065-15
Reference
PMID:21284899
  Authors
Tagliamonte M, Tornesello ML, Buonaguro FM, Buonaguro L
  Title
Conformational HIV-1 envelope on particulate structures: a tool for chemokine coreceptor binding studies.
  Journal
J Transl Med 9 Suppl 1:S1 (2011)
DOI:10.1186/1479-5876-9-S1-S1
Reference
PMID:31028522
  Authors
Novikova M, Zhang Y, Freed EO, Peng K
  Title
Multiple Roles of HIV-1 Capsid during the Virus Replication Cycle.
  Journal
Virol Sin 34:119-134 (2019)
DOI:10.1007/s12250-019-00095-3
Reference
PMID:30286189
  Authors
Rawle DJ, Harrich D
  Title
Toward the "unravelling" of HIV: Host cell factors involved in HIV-1 core uncoating.
  Journal
PLoS Pathog 14:e1007270 (2018)
DOI:10.1371/journal.ppat.1007270
Reference
PMID:25036886
  Authors
Le Sage V, Mouland AJ, Valiente-Echeverria F
  Title
Roles of HIV-1 capsid in viral replication and immune evasion.
  Journal
Virus Res 193:116-29 (2014)
DOI:10.1016/j.virusres.2014.07.010
Reference
PMID:32429351
  Authors
Murphy RE, Saad JS
  Title
The Interplay between HIV-1 Gag Binding to the Plasma Membrane and Env Incorporation.
  Journal
Viruses 12:E548 (2020)
DOI:10.3390/v12050548
Reference
PMID:21360054
  Authors
He N, Zhou Q
  Title
New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
  Journal
J Neuroimmune Pharmacol 6:260-8 (2011)
DOI:10.1007/s11481-011-9267-6
Reference
PMID:19865606
  Authors
Pincetic A, Leis J
  Title
The Mechanism of Budding of Retroviruses From Cell Membranes.
  Journal
Adv Virol 2009:6239691-6239699 (2009)
DOI:10.1155/2009/623969
Reference
PMID:32858867
  Authors
Kleinpeter AB, Freed EO
  Title
HIV-1 Maturation: Lessons Learned from Inhibitors.
  Journal
Viruses 12:E940 (2020)
DOI:10.3390/v12090940
Related
pathway
bspl03013  Nucleocytoplasmic transport
bspl04144  Endocytosis
KO pathway
ko03250   
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