KEGG   PATHWAY: cama00630
Entry
cama00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Citrobacter amalonaticus Y19
Class
Metabolism; Carbohydrate metabolism
Pathway map
cama00630  Glyoxylate and dicarboxylate metabolism
cama00630

Module
cama_M00012  Glyoxylate cycle [PATH:cama00630]
cama_M00621  Glycine cleavage system [PATH:cama00630]
Other DBs
GO: 0046487 0043648
Organism
Citrobacter amalonaticus Y19 [GN:cama]
Gene
F384_22080  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
F384_22715  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
F384_22075  malate synthase [KO:K01638] [EC:2.3.3.9]
F384_17770  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
F384_03160  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
F384_08015  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
F384_00600  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
F384_15415  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
F384_18585  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
F384_11935  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
F384_03460  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
F384_03290  glutamate mutase [KO:K19268] [EC:5.4.99.1]
F384_03300  methylaspartate mutase [KO:K01846] [EC:5.4.99.1]
F384_03285  methylaspartate ammonia-lyase [KO:K04835] [EC:4.3.1.2]
F384_05125  ghrA; bifunctional glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
F384_19280  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
F384_18395  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
F384_20950  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
F384_14000  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
F384_15995  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
F384_16005  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
F384_00585  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
F384_16000  glycine cleavage system protein H [KO:K02437]
F384_17175  garR; tartronate semialdehyde reductase [KO:K00042] [EC:1.1.1.60]
F384_15100  glycerate kinase [KO:K00865] [EC:2.7.1.165]
F384_17170  glycerate kinase [KO:K00865] [EC:2.7.1.165]
F384_07595  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
F384_04810  1,2-propanediol oxidoreductase [KO:K00048] [EC:1.1.1.77]
F384_24970  tartrate dehydratase [KO:K03779] [EC:4.2.1.32]
F384_24965  tartrate dehydratase subunit beta [KO:K03780] [EC:4.2.1.32]
F384_08690  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
F384_04935  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
F384_08935  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
F384_21085  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
F384_21090  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
F384_21080  formate dehydrogenase [KO:K00124]
F384_21075  formate dehydrogenase [KO:K00127]
F384_08215  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cama00010  Glycolysis / Gluconeogenesis
cama00020  Citrate cycle (TCA cycle)
cama00030  Pentose phosphate pathway
cama00053  Ascorbate and aldarate metabolism
cama00071  Fatty acid degradation
cama00230  Purine metabolism
cama00250  Alanine, aspartate and glutamate metabolism
cama00260  Glycine, serine and threonine metabolism
cama00620  Pyruvate metabolism
cama00710  Carbon fixation by Calvin cycle
cama00750  Vitamin B6 metabolism
cama00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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