KEGG   PATHWAY: ccar00030
Entry
ccar00030                   Pathway                                
Name
Pentose phosphate pathway - Cyprinus carpio (common carp)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ccar00030  Pentose phosphate pathway
ccar00030

Module
ccar_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ccar00030]
ccar_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ccar00030]
ccar_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ccar00030]
ccar_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ccar00030]
Other DBs
GO: 0006098
Organism
Cyprinus carpio (common carp) [GN:ccar]
Gene
109072508  gpi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
109101937  glucose-6-phosphate isomerase-like [KO:K01810] [EC:5.3.1.9]
109092716  g6pd; glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
109063312  6-phosphogluconolactonase-like [KO:K01057] [EC:3.1.1.31]
109058644  LOW QUALITY PROTEIN: GDH/6PGL endoplasmic bifunctional protein-like [KO:K13937] [EC:1.1.1.47 3.1.1.31]
109060966  pgd; 6-phosphogluconate dehydrogenase, decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
109094766  LOW QUALITY PROTEIN: ribulose-phosphate 3-epimerase-like [KO:K01783] [EC:5.1.3.1]
109066099  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
109064192  transketolase-like [KO:K00615] [EC:2.2.1.1]
109085462  transketolase-like [KO:K00615] [EC:2.2.1.1]
109068899  taldo1; transaldolase [KO:K00616] [EC:2.2.1.2]
109045295  LOW QUALITY PROTEIN: ribose-5-phosphate isomerase-like [KO:K01807] [EC:5.3.1.6]
109090409  shpk; sedoheptulokinase [KO:K11214] [EC:2.7.1.14]
109075615  dera; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
109074558  deoxyribose-phosphate aldolase-like [KO:K01619] [EC:4.1.2.4]
109079955  pgm1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
109077313  phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
109103573  LOW QUALITY PROTEIN: phosphoglucomutase-2-like [KO:K15779] [EC:5.4.2.2 5.4.2.7]
109101815  ribose-phosphate pyrophosphokinase 1-like [KO:K00948] [EC:2.7.6.1]
109064102  rgn; regucalcin isoform X1 [KO:K01053] [EC:3.1.1.17]
109108793  fructose-bisphosphate aldolase A [KO:K01623] [EC:4.1.2.13]
109093770  fructose-bisphosphate aldolase B-like [KO:K01623] [EC:4.1.2.13]
109097019  LOW QUALITY PROTEIN: fructose-bisphosphate aldolase A-like [KO:K01623] [EC:4.1.2.13]
109073536  LOW QUALITY PROTEIN: fructose-bisphosphate aldolase B-like [KO:K01623] [EC:4.1.2.13]
109103749  fructose-bisphosphate aldolase C-A isoform X1 [KO:K01623] [EC:4.1.2.13]
109098887  fructose-bisphosphate aldolase C [KO:K01623] [EC:4.1.2.13]
109084635  fructose-1,6-bisphosphatase isozyme 2-like [KO:K03841] [EC:3.1.3.11]
109080828  ATP-dependent 6-phosphofructokinase, platelet type-like [KO:K00850] [EC:2.7.1.11]
109093733  ATP-dependent 6-phosphofructokinase, liver type-like [KO:K00850] [EC:2.7.1.11]
109075368  ATP-dependent 6-phosphofructokinase, muscle type-like [KO:K00850] [EC:2.7.1.11]
109052574  ATP-dependent 6-phosphofructokinase, liver type-like [KO:K00850] [EC:2.7.1.11]
109049599  ATP-dependent 6-phosphofructokinase, platelet type-like isoform X1 [KO:K00850] [EC:2.7.1.11]
109091056  ATP-dependent 6-phosphofructokinase, muscle type-like [KO:K00850] [EC:2.7.1.11]
109077541  ATP-dependent 6-phosphofructokinase, platelet type-like isoform X1 [KO:K00850] [EC:2.7.1.11]
109063465  ATP-dependent 6-phosphofructokinase, muscle type-like [KO:K00850] [EC:2.7.1.11]
109073697  ATP-dependent 6-phosphofructokinase, platelet type-like [KO:K00850] [EC:2.7.1.11]
109057472  ATP-dependent 6-phosphofructokinase, liver type-like [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ccar00010  Glycolysis / Gluconeogenesis
ccar00040  Pentose and glucuronate interconversions
ccar00052  Galactose metabolism
ccar00230  Purine metabolism
ccar00240  Pyrimidine metabolism
ccar00340  Histidine metabolism
ccar00630  Glyoxylate and dicarboxylate metabolism
ccar00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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