KEGG   PATHWAY: ccx00030
Entry
ccx00030                    Pathway                                
Name
Pentose phosphate pathway - Corallococcus coralloides
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ccx00030  Pentose phosphate pathway
ccx00030

Module
ccx_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ccx00030]
ccx_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ccx00030]
ccx_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ccx00030]
ccx_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ccx00030]
Other DBs
GO: 0006098
Organism
Corallococcus coralloides [GN:ccx]
Gene
COCOR_07488  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
COCOR_00908  zwf; glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
COCOR_00907  pgl; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
COCOR_00906  gnd; 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
COCOR_06911  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
COCOR_07941  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
COCOR_02062  tktB; putative transketolase N-terminal section [KO:K00615] [EC:2.2.1.1]
COCOR_02063  dxs1; putative transketolase C-terminal section [KO:K00615] [EC:2.2.1.1]
COCOR_06741  tkt1; transketolase [KO:K00615] [EC:2.2.1.1]
COCOR_06469  tal; putative translaldolase [KO:K00616] [EC:2.2.1.2]
COCOR_06742  tal2; transaldolase family protein [KO:K00616] [EC:2.2.1.2]
COCOR_06641  rpiA; ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
COCOR_02629  rpiB; ribose 5-phosphate isomerase B [KO:K01808] [EC:5.3.1.6]
COCOR_01450  acetate kinase [KO:K01621] [EC:4.1.2.9 4.1.2.22]
COCOR_05152  phosphoketolase 2-like protein [KO:K01621] [EC:4.1.2.9 4.1.2.22]
COCOR_06196  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
COCOR_00599  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
COCOR_05347  metalloenzyme domain-containing protein [KO:K01839] [EC:5.4.2.7]
COCOR_02542  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
COCOR_07094  algC; phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
COCOR_00249  prs1; putative ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
COCOR_02414  prs; ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
COCOR_01407  gapN; glyceraldehyde-3-phosphate dehydrogenase2C putative [KO:K00131] [EC:1.2.1.9]
COCOR_00051  gcd; putative glucose 1-dehydrogenase [KO:K22969] [EC:1.1.1.47]
COCOR_01230  hypothetical protein [KO:K06152] [EC:1.1.99.3]
COCOR_00530  idnK; thermosensitive gluconokinase [KO:K00851] [EC:2.7.1.12]
COCOR_07126  PTS system mannose/fructose/sorbose family transporter subunit IIC [KO:K17466]
COCOR_01449  Fructose-bisphosphate aldolase class i [KO:K01623] [EC:4.1.2.13]
COCOR_04259  fba2; fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
COCOR_06991  pfkA; 6-phosphofructokinase I [KO:K21071] [EC:2.7.1.11 2.7.1.90]
COCOR_03924  pfkA1; 6-phosphofructokinase I [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
ccx00010  Glycolysis / Gluconeogenesis
ccx00040  Pentose and glucuronate interconversions
ccx00052  Galactose metabolism
ccx00230  Purine metabolism
ccx00240  Pyrimidine metabolism
ccx00340  Histidine metabolism
ccx00630  Glyoxylate and dicarboxylate metabolism
ccx00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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