KEGG   PATHWAY: clud03082
Entry
clud03082                   Pathway                                
Name
ATP-dependent chromatin remodeling - Canis lupus dingo (dingo)
Class
Genetic Information Processing; Chromosome
Pathway map
clud03082  ATP-dependent chromatin remodeling
clud03082

Organism
Canis lupus dingo (dingo) [GN:clud]
Gene
112654382  SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [KO:K11654] [EC:5.6.2.-]
112657122  BAZ1A; bromodomain adjacent to zinc finger domain protein 1A isoform X1 [KO:K11655]
112646158  BAZ1B; tyrosine-protein kinase BAZ1B [KO:K11658]
112678003  BAZ2A; bromodomain adjacent to zinc finger domain protein 2A isoform X2 [KO:K15224]
112674697  BAZ2B; bromodomain adjacent to zinc finger domain protein 2B isoform X6 [KO:K26167]
112662255  CHRAC1; LOW QUALITY PROTEIN: chromatin accessibility complex protein 1 [KO:K11656]
112649884  POLE3; DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
112642125  RSF1; remodeling and spacing factor 1 isoform X1 [KO:K11657]
112649146  SMARCA1; probable global transcription activator SNF2L1 isoform X1 [KO:K11727] [EC:5.6.2.-]
112652985  BPTF; nucleosome-remodeling factor subunit BPTF isoform X11 [KO:K11728]
112660549  RBBP4; histone-binding protein RBBP4 isoform X1 [KO:K10752]
112657503  histone-binding protein RBBP4-like [KO:K10752]
112653351  RBBP7; histone-binding protein RBBP7 isoform X1 [KO:K11659]
112647511  C5H17orf49; chromatin complexes subunit BAP18 isoform X3 [KO:K23406]
112668957  cat eye syndrome critical region protein 2 isoform X1 [KO:K25830]
112647423  CHD3; chromodomain-helicase-DNA-binding protein 3 isoform X1 [KO:K11642] [EC:5.6.2.-]
112675330  CHD4; chromodomain-helicase-DNA-binding protein 4 isoform X2 [KO:K11643] [EC:5.6.2.-]
112658381  HDAC2; histone deacetylase 2 isoform X1 [KO:K06067] [EC:3.5.1.98]
112659842  HDAC1; histone deacetylase 1 isoform X2 [KO:K06067] [EC:3.5.1.98]
112644098  MBD2; methyl-CpG-binding domain protein 2 [KO:K11590]
112666199  MBD3; methyl-CpG-binding domain protein 3 isoform X1 [KO:K11591]
112656996  MTA1; metastasis-associated protein MTA1 isoform X1 [KO:K11660]
112659537  MTA2; metastasis-associated protein MTA2 isoform X1 [KO:K11660]
112664455  MTA3; metastasis-associated protein MTA3 isoform X4 [KO:K11660]
112666785  GATAD2A; transcriptional repressor p66-alpha isoform X5 [KO:K23194]
112647747  GATAD2B; transcriptional repressor p66-beta isoform X1 [KO:K23194]
112649142  PHF6; PHD finger protein 6 isoform X1 [KO:K23310]
112676470  CDK2AP1; cyclin-dependent kinase 2-associated protein 1 isoform X2 [KO:K26454]
112664167  cyclin-dependent kinase 2-associated protein 1-like [KO:K26454]
112659394  CDK2AP2; cyclin-dependent kinase 2-associated protein 2 [KO:K26455]
112644776  SMARCA2; probable global transcription activator SNF2L2 isoform X1 [KO:K11647] [EC:5.6.2.-]
112666518  SMARCA4; transcription activator BRG1 isoform X1 [KO:K11647] [EC:5.6.2.-]
112676938  SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 [KO:K11648]
112678020  SMARCC2; SWI/SNF complex subunit SMARCC2 isoform X1 [KO:K11649]
112665715  SMARCC1; SWI/SNF complex subunit SMARCC1 isoform X1 [KO:K11649]
112678315  SMARCD1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1 [KO:K11650]
112663550  SMARCD3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1 [KO:K11650]
112652914  SMARCD2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1 [KO:K11650]
112644238  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like [KO:K11650]
112671041  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 [KO:K11651]
112654984  SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X3 [KO:K11651]
112673952  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like [KO:K11651]
112646354  ACTB; actin, cytoplasmic 1 isoform X1 [KO:K05692]
112672928  ACTG1; actin, cytoplasmic 2 [KO:K05692]
112653534  actin, cytoplasmic 2-like [KO:K05692]
112662848  ACTL6A; actin-like protein 6A isoform X2 [KO:K11340]
112646229  ACTL6B; actin-like protein 6B [KO:K11652]
112646157  BCL7B; B-cell CLL/lymphoma 7 protein family member B isoform X1 [KO:K25605]
112640114  BCL7C; B-cell CLL/lymphoma 7 protein family member C isoform X3 [KO:K25605]
112676499  BCL7A; B-cell CLL/lymphoma 7 protein family member A isoform X1 [KO:K25605]
112647940  SS18; protein SSXT isoform X4 [KO:K15623]
112674224  SS18L1; calcium-responsive transactivator [KO:K15623]
112644345  ARID1B; AT-rich interactive domain-containing protein 1B isoform X4 [KO:K11653]
112660546  ARID1A; AT-rich interactive domain-containing protein 1A isoform X2 [KO:K11653]
112656875  DPF3; zinc finger protein DPF3 isoform X4 [KO:K22198]
112645533  DPF1; zinc finger protein neuro-d4 isoform X1 [KO:K22198]
112659350  DPF2; zinc finger protein ubi-d4 isoform X1 [KO:K13196]
112678218  ARID2; AT-rich interactive domain-containing protein 2 isoform X1 [KO:K11765]
112665890  PBRM1; protein polybromo-1 isoform X1 [KO:K11757]
112660529  BRD7; bromodomain-containing protein 7 isoform X1 [KO:K11723]
112658273  PHF10; PHD finger protein 10 isoform X1 [KO:K22197]
112662882  BRD9; bromodomain-containing protein 9 isoform X1 [KO:K22184]
112645229  BICRA; BRD4-interacting chromatin-remodeling complex-associated protein isoform X1 [KO:K25612]
112641597  BICRAL; LOW QUALITY PROTEIN: BRD4-interacting chromatin-remodeling complex-associated protein-like [KO:K25613]
112676096  INO80; chromatin-remodeling ATPase INO80 [KO:K11665] [EC:5.6.2.-]
112664248  INO80B; INO80 complex subunit B isoform X1 [KO:K11666]
112647878  INO80C; INO80 complex subunit C isoform X1 [KO:K11667]
112656708  INO80D; INO80 complex subunit D [KO:K11668]
112640068  INO80E; INO80 complex subunit E isoform X1 [KO:K11669]
112645025  TFPT; TCF3 fusion partner isoform X1 [KO:K11670]
112671063  NFRKB; nuclear factor related to kappa-B-binding protein isoform X1 [KO:K11671]
112678295  MCRS1; microspherule protein 1 isoform X2 [KO:K11674]
112643170  UCHL5; ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1 [KO:K05610] [EC:3.4.19.12]
112660563  RUVBL1; ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
112645176  RUVBL2; ruvB-like 2 isoform X2 [KO:K11338] [EC:5.6.2.3]
112673944  ACTR5; actin-related protein 5 isoform X2 [KO:K11672]
112665923  ACTR8; actin-related protein 8 isoform X1 [KO:K11673]
112656849  YY1; transcriptional repressor protein YY1 [KO:K09201]
112640107  helicase SRCAP isoform X1 [KO:K11661] [EC:5.6.2.-]
112642613  DMAP1; DNA methyltransferase 1-associated protein 1 [KO:K11324]
112677872  YEATS4; YEATS domain-containing protein 4 isoform X1 [KO:K11341]
112663974  VPS72; vacuolar protein sorting-associated protein 72 homolog isoform X1 [KO:K11664]
112663139  vacuolar protein sorting-associated protein 72 homolog [KO:K11664]
112644738  histone H2A.Z isoform X1 [KO:K11251]
112655879  histone H2A-Bbd type 1-like [KO:K11251]
112656772  histone H2A type 1 [KO:K11251]
112656781  histone H2A type 1-E [KO:K11251]
112657011  histone H2A type 1-H [KO:K11251]
112671218  histone H2AX [KO:K11251]
112650295  core histone macro-H2A.1 isoform X1 [KO:K11251]
112650910  histone H2A.V isoform X1 [KO:K11251]
112651244  core histone macro-H2A.2 [KO:K11251]
112664033  histone H2A type 2-A [KO:K11251]
112664034  histone H2A type 2-B [KO:K11251]
112664035  histone H2A type 2-C [KO:K11251]
112674383  histone H2A type 1-E [KO:K11251]
112674385  histone H2A type 1 [KO:K11251]
112674386  histone H2A type 1-B [KO:K11251]
112674388  histone H2A type 1-E-like [KO:K11251]
112674389  histone H2A type 1-H [KO:K11251]
112674396  histone H2A type 1-E-like [KO:K11251]
112674399  histone H2A type 1-H [KO:K11251]
112674458  histone H2A type 1-E [KO:K11251]
112665318  histone H2A type 3 [KO:K11251]
112665431  histone H2A.J [KO:K11251]
112655080  histone H2A-Bbd type 1 [KO:K11251]
112664032  histone H2A type 2-A [KO:K11251]
125754361  histone H2A type 1-E [KO:K11251]
118353424  histone H2A type 1-H-like [KO:K11251]
112656773  histone H2A type 1-E [KO:K11251]
112660121  histone H2A.Z-like [KO:K11251]
112654858  ACTR6; actin-related protein 6 isoform X1 [KO:K11662]
112646207  ZNHIT1; zinc finger HIT domain-containing protein 1 [KO:K11663]
112676395  EP400; LOW QUALITY PROTEIN: E1A-binding protein p400 [KO:K11320] [EC:5.6.2.-]
112646058  LOW QUALITY PROTEIN: transformation/transcription domain-associated protein [KO:K08874]
112653369  MORF4L1; mortality factor 4-like protein 1 isoform X1 [KO:K11339]
112649362  MORF4L2; mortality factor 4-like protein 2 [KO:K11342]
112674242  MRG/MORF4L-binding protein [KO:K11343]
112650549  BRD8; bromodomain-containing protein 8 isoform X1 [KO:K11321]
112670818  ING3; inhibitor of growth protein 3 [KO:K11319]
112670358  EPC1; enhancer of polycomb homolog 1 isoform X1 [KO:K11322]
112649454  EPC2; LOW QUALITY PROTEIN: enhancer of polycomb homolog 2 [KO:K11322]
112642381  MEAF6; chromatin modification-related protein MEAF6 isoform X2 [KO:K11344]
125752752  chromatin modification-related protein MEAF6 [KO:K11344]
112659351  KAT5; histone acetyltransferase KAT5 isoform X1 [KO:K11304] [EC:2.3.1.48]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
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