KEGG   PATHWAY: cud03082
Entry
cud03082                    Pathway                                
Name
ATP-dependent chromatin remodeling - Cheilinus undulatus (humphead wrasse)
Class
Genetic Information Processing; Chromosome
Pathway map
cud03082  ATP-dependent chromatin remodeling
cud03082

Organism
Cheilinus undulatus (humphead wrasse) [GN:cud]
Gene
121509018  smarca5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [KO:K11654] [EC:5.6.2.-]
121518950  baz1b; tyrosine-protein kinase BAZ1B [KO:K11658]
121517096  baz2a; bromodomain adjacent to zinc finger domain protein 2A isoform X1 [KO:K15224]
121522493  bromodomain adjacent to zinc finger domain protein 2B isoform X1 [KO:K26167]
121509121  baz2ba; bromodomain adjacent to zinc finger domain protein 2B isoform X1 [KO:K26167]
121524554  chrac1; chromatin accessibility complex protein 1 [KO:K11656]
121513985  pole3; DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
121518584  rsf1b.1; remodeling and spacing factor 1 [KO:K11657]
121517698  rsf1a; remodeling and spacing factor 1 isoform X1 [KO:K11657]
121509041  nucleosome-remodeling factor subunit BPTF-like isoform X1 [KO:K11728]
121524356  rbbp4; histone-binding protein RBBP4 [KO:K10752]
121525800  histone-binding protein RBBP4 [KO:K10752]
121513817  histone-binding protein RBBP7 isoform X1 [KO:K10752]
121506631  zgc:92664; chromatin complexes subunit BAP18 isoform X1 [KO:K23406]
121518619  c12h17orf49; chromatin complexes subunit BAP18 [KO:K23406]
121515368  cat eye syndrome critical region protein 2 homolog [KO:K25830]
121504272  chd3; chromodomain-helicase-DNA-binding protein 3 isoform X1 [KO:K11642] [EC:5.6.2.-]
121513438  chd4b; chromodomain-helicase-DNA-binding protein 4 isoform X1 [KO:K11643] [EC:5.6.2.-]
121523974  chd4a; chromodomain-helicase-DNA-binding protein 4a isoform X1 [KO:K11643] [EC:5.6.2.-]
121520914  histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
121526747  probable histone deacetylase 1-B isoform X1 [KO:K06067] [EC:3.5.1.98]
121525527  mbd2; methyl-CpG-binding domain protein 2 [KO:K11590]
121512759  mbd3b; methyl-CpG-binding domain protein 3b isoform X1 [KO:K11591]
121520473  mbd3a; methyl-CpG-binding domain protein 3a [KO:K11591]
121504469  mta2; metastasis-associated protein MTA2 [KO:K11660]
121526752  mta1; metastasis-associated protein MTA1 [KO:K11660]
121528085  mta3; metastasis-associated protein MTA3 [KO:K11660]
121512320  gatad2ab; GATA zinc finger domain containing 2Ab [KO:K23194]
121520190  transcriptional repressor p66 alpha-like isoform X1 [KO:K23194]
121523398  gatad2b; transcriptional repressor p66-beta [KO:K23194]
121515894  phf6; PHD finger protein 6 [KO:K23310]
121525354  cyclin-dependent kinase 2-associated protein 1 isoform X1 [KO:K26454]
121508620  cdk2ap2; cyclin-dependent kinase 2-associated protein 2 [KO:K26455]
121508200  transcription activator BRG1 isoform X1 [KO:K11647] [EC:5.6.2.-]
121509422  smarca2; probable global transcription activator SNF2L2 [KO:K11647] [EC:5.6.2.-]
121529409  smarca4a; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a [KO:K11647] [EC:5.6.2.-]
121509861  smarcb1a; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A [KO:K11648]
121525393  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like [KO:K11648]
121512993  smarcc1a; SWI/SNF complex subunit SMARCC1 [KO:K11649]
121504538  smarcc2; SWI/SNF complex subunit SMARCC2 isoform X1 [KO:K11649]
121523494  smarcc1b; SWI/SNF complex subunit SMARCC1b [KO:K11649]
121507198  smarcd1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 [KO:K11650]
121527313  smarcd3b; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1 [KO:K11650]
121528868  smarcd2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 [KO:K11650]
121508012  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 [KO:K11651]
121529064  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1 [KO:K11651]
121507739  actb1; actin, cytoplasmic 1 [KO:K05692]
121529367  actb2; actin, cytoplasmic 2 [KO:K05692]
121512535  actl6a; actin-like protein 6A [KO:K11340]
121518960  bcl7bb; B-cell CLL/lymphoma 7 protein family member B-B [KO:K25605]
121524707  bcl7a; B-cell CLL/lymphoma 7 protein family member A [KO:K25605]
121517917  calcium-responsive transactivator-like [KO:K15623]
121520349  ss18; protein SSXT isoform X1 [KO:K15623]
121513283  arid1aa; AT-rich interactive domain-containing protein 1A [KO:K11653]
121526521  AT-rich interactive domain-containing protein 1B-like isoform X1 [KO:K11653]
121521188  arid1b; AT-rich interactive domain-containing protein 1B [KO:K11653]
121523429  arid1ab; AT-rich interactive domain-containing protein 1A [KO:K11653]
121524750  dpf1; zinc finger protein neuro-d4 [KO:K22198]
121526783  zinc finger protein DPF3-like isoform X1 [KO:K22198]
121521660  dpf3; zinc finger protein DPF3 [KO:K22198]
121518587  dpf2; zinc finger protein ubi-d4 isoform X1 [KO:K13196]
121516648  dpf2l; D4, zinc and double PHD fingers family 2, like isoform X1 [KO:K13196]
121505357  arid2; AT-rich interactive domain-containing protein 2 isoform X1 [KO:K11765]
121506711  pbrm1l; polybromo 1, like [KO:K11757]
121506894  pbrm1; protein polybromo-1 isoform X1 [KO:K11757]
121508490  brd7; bromodomain-containing protein 7 [KO:K11723]
121512875  phf10; PHD finger protein 10 [KO:K22197]
121514054  brd9; bromodomain-containing protein 9 isoform X1 [KO:K22184]
121520490  bicra; BRD4-interacting chromatin-remodeling complex-associated protein isoform X1 [KO:K25612]
121528121  bicral; BRD4-interacting chromatin-remodeling complex-associated protein-like [KO:K25613]
121521316  ino80; chromatin-remodeling ATPase INO80 [KO:K11665] [EC:5.6.2.-]
121504282  ino80b; INO80 complex subunit B [KO:K11666]
121513723  ino80c; INO80 complex subunit C isoform X1 [KO:K11667]
121523050  INO80 complex subunit D [KO:K11668]
121513849  ino80e; INO80 complex subunit E [KO:K11669]
121513378  tfpt; TCF3 fusion partner [KO:K11670]
121518954  nfrkb; nuclear factor related to kappa-B-binding protein [KO:K11671]
121529420  mcrs1; microspherule protein 1 [KO:K11674]
121511827  uchl5; ubiquitin carboxyl-terminal hydrolase isozyme L5 [KO:K05610] [EC:3.4.19.12]
121507402  ruvbl1; ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
121518382  ruvbl2; ruvB-like 2 [KO:K11338] [EC:5.6.2.3]
121517733  actr5; actin-related protein 5 [KO:K11672]
121518158  actr8; actin-related protein 8 [KO:K11673]
121526705  yy1a; transcriptional repressor protein YY1a [KO:K09201]
121521533  yy1b; transcriptional repressor protein YY1b isoform X1 [KO:K09201]
121528071  uncharacterized protein LOC121528071 isoform X1 [KO:K11661] [EC:5.6.2.-]
121511777  dmap1; DNA methyltransferase 1-associated protein 1 [KO:K11324]
121505249  yeats4; YEATS domain-containing protein 4 [KO:K11341]
121523265  vps72a; vacuolar protein sorting 72 homolog a [KO:K11664]
121505508  histone H2A.J-like [KO:K11251]
121505509  histone H2A.J [KO:K11251]
121505510  histone H2A type 1-J-like [KO:K11251]
121508138  histone H2A [KO:K11251]
121508292  histone H2A-like [KO:K11251]
121508294  histone H2A [KO:K11251]
121508295  histone H2A [KO:K11251]
121508296  histone H2A-like [KO:K11251]
121508436  histone H2A-like [KO:K11251]
121508437  histone H2A-like [KO:K11251]
121508438  histone H2A-like [KO:K11251]
121508926  histone H2A-like [KO:K11251]
121508930  histone H2A [KO:K11251]
121508931  histone H2A [KO:K11251]
121509683  histone H2A.V isoform X1 [KO:K11251]
121504168  histone H2A.Z [KO:K11251]
121510592  core histone macro-H2A.2 [KO:K11251]
121518489  histone H2A-beta, sperm-like [KO:K11251]
121518490  histone H2A-beta, sperm-like [KO:K11251]
121518696  histone H2A-beta, sperm-like [KO:K11251]
121518751  histone H2A [KO:K11251]
121519122  core histone macro-H2A.1 isoform X1 [KO:K11251]
121519308  histone H2AX [KO:K11251]
121519796  histone H2A-like [KO:K11251]
121519835  histone H2A-like [KO:K11251]
121519889  histone H2A-like [KO:K11251]
121514855  histone H2A-beta, sperm-like [KO:K11251]
121514856  histone H2A-like isoform X1 [KO:K11251]
121514857  histone H2A [KO:K11251]
121514858  histone H2A [KO:K11251]
121514860  histone H2A-beta, sperm-like [KO:K11251]
121514872  histone H2A-like [KO:K11251]
121515104  histone H2A-like [KO:K11251]
121515284  histone H2A-like [KO:K11251]
121515288  histone H2A [KO:K11251]
121523855  late histone H2A.2.2 [KO:K11251]
121514520  actr6; actin-related protein 6 [KO:K11662]
121504499  znhit1; zinc finger HIT domain-containing protein 1 [KO:K11663]
121509393  ep400; E1A-binding protein p400 isoform X1 [KO:K11320] [EC:5.6.2.-]
121528013  transformation/transcription domain-associated protein [KO:K08874]
121507969  mortality factor 4-like protein 1 isoform X1 [KO:K11339]
121515167  morf4l1; mortality factor 4-like protein 1 [KO:K11339]
121517004  MRG/MORF4L-binding protein [KO:K11343]
121519333  brd8a; bromodomain-containing protein 8 isoform X1 [KO:K11321]
121516310  brd8b; bromodomain-containing protein 8 [KO:K11321]
121505823  ing3; inhibitor of growth protein 3 [KO:K11319]
121519966  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
121527133  enhancer of polycomb homolog 1-like isoform X1 [KO:K11322]
121524381  meaf6; chromatin modification-related protein MEAF6 isoform X1 [KO:K11344]
121518832  histone acetyltransferase KAT5 isoform X1 [KO:K11304] [EC:2.3.1.48]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
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