KEGG   PATHWAY: ddi00970
Entry
ddi00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Dictyostelium discoideum (cellular slime mold)
Class
Genetic Information Processing; Translation
Pathway map
ddi00970  Aminoacyl-tRNA biosynthesis
ddi00970

Organism
Dictyostelium discoideum (cellular slime mold) [GN:ddi]
Gene
DidioMt60  trnA; tRNA-Ala [KO:K14218]
DidioMt50  trnR; tRNA-Arg [KO:K14219]
DidioMt47  trnN; tRNA-Asn [KO:K14220]
DidioMt46  trnC; tRNA-Cys [KO:K14222]
DidioMt44  trnQ; tRNA-Gln [KO:K14223]
DidioMt61  trnE; tRNA-Glu [KO:K14224]
DidioMt56  trnH; tRNA-His [KO:K14226]
DidioMt54  trnI1; tRNA-Ile [KO:K14227]
DidioMt55  trnI2; tRNA-Ile [KO:K14227]
DidioMt59  trnL2; tRNA-Leu [KO:K14228]
DidioMt58  trnL1; tRNA-Leu [KO:K14228]
DidioMt49  trnK; tRNA-Lys [KO:K14229]
DidioMt48  trnM; tRNA-Met [KO:K14230]
DidioMt52  trnI3; tRNA-Ile [KO:K14230]
DidioMt57  trnF; tRNA-Phe [KO:K14231]
DidioMt51  trnP; tRNA-Pro [KO:K14232]
DidioMt45  trnW; tRNA-Trp [KO:K14235]
DidioMt53  trnY; tRNA-Tyr [KO:K14236]
DDB_G0287467  gluS; glutamate-tRNA ligase [KO:K01885] [EC:6.1.1.17]
DDB_G0271906  mgluS; glutamate-tRNA ligase [KO:K01885] [EC:6.1.1.17]
DDB_G0286875  gatA; glutamyl-tRNA amidotransferase A subunit [KO:K02433] [EC:6.3.5.6 6.3.5.7]
DDB_G0268776  gatB; glutamyl-tRNA amidotransferase B subunit [KO:K02434] [EC:6.3.5.6 6.3.5.7]
DDB_G0284291  gatC; glutamyl-tRNA amidotransferase C subunit [KO:K02435] [EC:6.3.5.6 6.3.5.7]
DDB_G0289481  glnS; glutamine-tRNA ligase [KO:K01886] [EC:6.1.1.18]
DDB_G0275655  malaS; alanine-tRNA ligase [KO:K01872] [EC:6.1.1.7]
DDB_G0277823  alaS; alanine-tRNA ligase [KO:K01872] [EC:6.1.1.7]
DDB_G0272236  aspS1; aspartate-tRNA ligase [KO:K22503] [EC:6.1.1.12]
DDB_G0270152  maspS; aspartate-tRNA ligase [KO:K01876] [EC:6.1.1.12]
DDB_G0272304  aspS2; aspartate-tRNA ligase [KO:K01876] [EC:6.1.1.12]
DDB_G0275263  asnS1; asparagine-tRNA ligase [KO:K01893] [EC:6.1.1.22]
DDB_G0268100  asnS2; asparagine-tRNA ligase [KO:K01893] [EC:6.1.1.22]
DDB_G0284583  glyS; glycine-tRNA ligase [KO:K01880] [EC:6.1.1.14]
DDB_G0288267  thrS1; threonine-tRNA ligase [KO:K01868] [EC:6.1.1.3]
DDB_G0274545  thrS2; threonine-tRNA ligase [KO:K01868] [EC:6.1.1.3]
DDB_G0272660  serS; serine-tRNA ligase [KO:K01875] [EC:6.1.1.11]
DDB_G0267604  mserS; serine-tRNA ligase [KO:K01875] [EC:6.1.1.11]
DDB_G0280197  sepsecs; O-phosphoseryl-tRNA selenium transferase [KO:K03341] [EC:2.9.1.2]
DDB_G0287159  cysS; cysteine-tRNA ligase [KO:K01883] [EC:6.1.1.16]
DDB_G0277295  mcysS; cysteine-tRNA ligase [KO:K01883] [EC:6.1.1.16]
DDB_G0285759  mmetS; methionine-tRNA ligase [KO:K01874] [EC:6.1.1.10]
DDB_G0279113  metS; methionine-tRNA ligase [KO:K01874] [EC:6.1.1.10]
DDB_G0277347  hypothetical protein [KO:K00604] [EC:2.1.2.9]
DDB_G0277733  valS1; valine-tRNA ligase [KO:K01873] [EC:6.1.1.9]
DDB_G0288939  valS2; valine-tRNA ligase [KO:K01873] [EC:6.1.1.9]
DDB_G0291346  mleuS; leucine-tRNA ligase [KO:K01869] [EC:6.1.1.4]
DDB_G0285451  leuS; leucine-tRNA ligase [KO:K01869] [EC:6.1.1.4]
DDB_G0278293  ileS; isoleucine-tRNA ligase [KO:K01870] [EC:6.1.1.5]
DDB_G0293030  mileS; isoleucine-tRNA ligase [KO:K01870] [EC:6.1.1.5]
DDB_G0281437  lysS; lysine-tRNA ligase [KO:K04567] [EC:6.1.1.6]
DDB_G0286517  mlysS; leucyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
DDB_G0272867  argS1; arginine-tRNA ligase [KO:K01887] [EC:6.1.1.19]
DDB_G0287803  argS2; arginine-tRNA ligase [KO:K01887] [EC:6.1.1.19]
DDB_G0276079  mproS; proline-tRNA ligase [KO:K01881] [EC:6.1.1.15]
DDB_G0284197  proS; proline-tRNA ligase [KO:K01881] [EC:6.1.1.15]
DDB_G0269822  mhisS; histidine-tRNA ligase [KO:K01892] [EC:6.1.1.21]
DDB_G0274159  hisS; histidine-tRNA ligase [KO:K01892] [EC:6.1.1.21]
DDB_G0287141  pheSA; phenylalanine-tRNA ligase, alpha subunit [KO:K01889] [EC:6.1.1.20]
DDB_G0274371  mpheS; phenylalanine-tRNA ligase [KO:K01889] [EC:6.1.1.20]
DDB_G0277303  pheSB; phenylalanine-tRNA ligase, beta subunit [KO:K01890] [EC:6.1.1.20]
DDB_G0276721  tyrS; tyrosine-tRNA ligase [KO:K01866] [EC:6.1.1.1]
DDB_G0279715  mtyrS; tyrosine-tRNA ligase [KO:K01866] [EC:6.1.1.1]
DDB_G0269454  trpS; tryptophan-tRNA ligase [KO:K01867] [EC:6.1.1.2]
DDB_G0274567  mtrpS; tryptophan-tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ddi00250  Alanine, aspartate and glutamate metabolism
ddi00260  Glycine, serine and threonine metabolism
ddi00270  Cysteine and methionine metabolism
ddi00290  Valine, leucine and isoleucine biosynthesis
ddi00300  Lysine biosynthesis
ddi00330  Arginine and proline metabolism
ddi00340  Histidine metabolism
ddi00380  Tryptophan metabolism
ddi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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