KEGG   PATHWAY: der00020
Entry
der00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Drosophila erecta
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
der00020  Citrate cycle (TCA cycle)
der00020

Module
der_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:der00020]
der_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:der00020]
der_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:der00020]
der_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:der00020]
der_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:der00020]
Other DBs
GO: 0006099
Organism
Drosophila erecta [GN:der]
Gene
6551377  probable citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
6553869  probable citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
6548754  ATP-citrate synthase isoform X2 [KO:K01648] [EC:2.3.3.8]
6548800  probable aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
6554799  cytoplasmic aconitate hydratase [KO:K01681] [EC:4.2.1.3]
6552028  cytoplasmic aconitate hydratase [KO:K01681] [EC:4.2.1.3]
6551895  probable aconitate hydratase, mitochondrial [KO:K01681] [EC:4.2.1.3]
6545662  isocitrate dehydrogenase [NADP] cytoplasmic isoform X1 [KO:K00031] [EC:1.1.1.42]
6554575  isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial isoform X1 [KO:K00030] [EC:1.1.1.41]
6555419  isocitrate dehydrogenase [NAD] subunit beta, mitochondrial [KO:K00030] [EC:1.1.1.41]
6550350  probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [KO:K00030] [EC:1.1.1.41]
26526064  nascent polypeptide-associated complex subunit alpha, muscle-specific form [KO:K00030] [EC:1.1.1.41]
6548093  probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [KO:K00030] [EC:1.1.1.41]
6548659  isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial [KO:K00030] [EC:1.1.1.41]
6543916  2-oxoglutarate dehydrogenase-like, mitochondrial isoform X1 [KO:K00164] [EC:1.2.4.2]
6545608  2-oxoglutarate dehydrogenase, mitochondrial isoform X2 [KO:K00164] [EC:1.2.4.2]
6551808  dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [KO:K00658] [EC:2.3.1.61]
6546358  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
6546384  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
6554041  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [KO:K01899] [EC:6.2.1.4 6.2.1.5]
6544358  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial [KO:K01900] [EC:6.2.1.4 6.2.1.5]
6552437  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial isoform X1 [KO:K01900] [EC:6.2.1.4 6.2.1.5]
6544707  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
6547422  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [KO:K00234] [EC:1.3.5.1]
6541693  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [KO:K00235] [EC:1.3.5.1]
6550215  succinate dehydrogenase [ubiquinone] iron-sulfur subunit [KO:K00235] [EC:1.3.5.1]
6551785  succinate dehydrogenase cytochrome b560 subunit, mitochondrial [KO:K00236]
6551897  uncharacterized protein LOC6551897 [KO:K00236]
6554249  succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial [KO:K00237]
6544586  fumarate hydratase, mitochondrial [KO:K01679] [EC:4.2.1.2]
26527022  fumarate hydratase, mitochondrial [KO:K01679] [EC:4.2.1.2]
6551485  fumarate hydratase, mitochondrial isoform X1 [KO:K01679] [EC:4.2.1.2]
6551486  fumarate hydratase, mitochondrial [KO:K01679] [EC:4.2.1.2]
6542444  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
6545014  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
6545015  uncharacterized protein LOC6545015 [KO:K00026] [EC:1.1.1.37]
6551932  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
6541305  pyruvate carboxylase, mitochondrial isoform X1 [KO:K01958] [EC:6.4.1.1]
6546935  phosphoenolpyruvate carboxykinase [GTP] isoform X1 [KO:K01596] [EC:4.1.1.32]
6546936  phosphoenolpyruvate carboxykinase [GTP] [KO:K01596] [EC:4.1.1.32]
6551104  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial isoform X1 [KO:K00161] [EC:1.2.4.1]
6550977  probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
6555013  pyruvate dehydrogenase E1 component subunit beta, mitochondrial isoform X1 [KO:K00162] [EC:1.2.4.1]
6542519  dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
der00010  Glycolysis / Gluconeogenesis
der00053  Ascorbate and aldarate metabolism
der00061  Fatty acid biosynthesis
der00062  Fatty acid elongation
der00071  Fatty acid degradation
der00190  Oxidative phosphorylation
der00220  Arginine biosynthesis
der00250  Alanine, aspartate and glutamate metabolism
der00280  Valine, leucine and isoleucine degradation
der00350  Tyrosine metabolism
der00470  D-Amino acid metabolism
der00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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